Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.77■■□□□ 1.08
CPT1AP50416 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPT1AP50416 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPT1AP50416 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPT1AP50416 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPT1AP50416 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.76■■□□□ 1.07
CPT1AP50416 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.76■■□□□ 1.07
CPT1AP50416 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPT1AP50416 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPT1AP50416 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPT1AP50416 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CPT1AP50416 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPT1AP50416 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.76■■□□□ 1.07
CPT1AP50416 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.76■■□□□ 1.07
CPT1AP50416 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPT1AP50416 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.76■■□□□ 1.07
CPT1AP50416 AL160286.2-201ENST00000567150 934 ntBASIC21.76■■□□□ 1.07
CPT1AP50416 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.76■■□□□ 1.07
CPT1AP50416 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CPT1AP50416 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPT1AP50416 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPT1AP50416 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.75■■□□□ 1.07
CPT1AP50416 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CPT1AP50416 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CPT1AP50416 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CPT1AP50416 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.75■■□□□ 1.07
CPT1AP50416 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CPT1AP50416 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 AC117947.1-201ENST00000427448 529 ntBASIC21.75■■□□□ 1.07
CPT1AP50416 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CPT1AP50416 AC007663.1-201ENST00000438948 1240 ntBASIC21.75■■□□□ 1.07
CPT1AP50416 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.75■■□□□ 1.07
CPT1AP50416 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.75■■□□□ 1.07
CPT1AP50416 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CPT1AP50416 AL138966.2-201ENST00000621997 464 ntBASIC21.75■■□□□ 1.07
CPT1AP50416 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CPT1AP50416 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPT1AP50416 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPT1AP50416 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.74■■□□□ 1.07
CPT1AP50416 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPT1AP50416 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPT1AP50416 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPT1AP50416 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.74■■□□□ 1.07
CPT1AP50416 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.74■■□□□ 1.07
CPT1AP50416 TSPY17P-201ENST00000450329 467 ntBASIC21.74■■□□□ 1.07
CPT1AP50416 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.74■■□□□ 1.07
CPT1AP50416 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CPT1AP50416 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPT1AP50416 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPT1AP50416 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPT1AP50416 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CPT1AP50416 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPT1AP50416 AC092338.2-201ENST00000568827 1415 ntBASIC21.73■■□□□ 1.07
CPT1AP50416 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.73■■□□□ 1.07
CPT1AP50416 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPT1AP50416 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CPT1AP50416 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CPT1AP50416 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.73■■□□□ 1.07
CPT1AP50416 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CPT1AP50416 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.73■■□□□ 1.07
CPT1AP50416 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.73■■□□□ 1.07
CPT1AP50416 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.73■■□□□ 1.07
CPT1AP50416 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.73■■□□□ 1.07
CPT1AP50416 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.73■■□□□ 1.07
CPT1AP50416 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
CPT1AP50416 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CPT1AP50416 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CPT1AP50416 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPT1AP50416 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.73■■□□□ 1.07
CPT1AP50416 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPT1AP50416 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.73■■□□□ 1.07
CPT1AP50416 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPT1AP50416 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.73■■□□□ 1.07
CPT1AP50416 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CPT1AP50416 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
CPT1AP50416 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.72■■□□□ 1.07
CPT1AP50416 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.72■■□□□ 1.07
CPT1AP50416 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.72■■□□□ 1.07
CPT1AP50416 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 RNF152P1-201ENST00000397754 604 ntBASIC21.72■■□□□ 1.07
CPT1AP50416 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms