Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC9A3P48764 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
SLC9A3P48764 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC9A3P48764 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SLC9A3P48764 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.91■□□□□ 0.46
SLC9A3P48764 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC9A3P48764 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC9A3P48764 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC9A3P48764 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC9A3P48764 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC9A3P48764 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
SLC9A3P48764 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC9A3P48764 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC9A3P48764 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC9A3P48764 PHGDH-210ENST00000641115 1638 ntBASIC17.9■□□□□ 0.46
SLC9A3P48764 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC9A3P48764 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC9A3P48764 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC9A3P48764 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC9A3P48764 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC9A3P48764 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC9A3P48764 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC9A3P48764 AC005181.1-201ENST00000604782 1256 ntBASIC17.9■□□□□ 0.46
SLC9A3P48764 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.9■□□□□ 0.46
SLC9A3P48764 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC9A3P48764 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC9A3P48764 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC9A3P48764 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC9A3P48764 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC9A3P48764 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SLC9A3P48764 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SLC9A3P48764 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SLC9A3P48764 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
SLC9A3P48764 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC9A3P48764 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC9A3P48764 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC9A3P48764 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC9A3P48764 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC9A3P48764 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 AC093484.2-201ENST00000580996 2166 ntBASIC17.89■□□□□ 0.45
SLC9A3P48764 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC9A3P48764 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 AC133552.2-202ENST00000575694 574 ntBASIC17.89■□□□□ 0.45
SLC9A3P48764 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC9A3P48764 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC9A3P48764 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
SLC9A3P48764 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC9A3P48764 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC9A3P48764 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC9A3P48764 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC9A3P48764 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC9A3P48764 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms