Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.68■□□□□ 0.9
CHKAP35790 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.68■□□□□ 0.9
CHKAP35790 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 AC133681.1-201ENST00000465482 601 ntBASIC20.68■□□□□ 0.9
CHKAP35790 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.68■□□□□ 0.9
CHKAP35790 RPS2P4-201ENST00000476944 856 ntBASIC20.68■□□□□ 0.9
CHKAP35790 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.68■□□□□ 0.9
CHKAP35790 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CHKAP35790 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.68■□□□□ 0.9
CHKAP35790 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CHKAP35790 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.68■□□□□ 0.9
CHKAP35790 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CHKAP35790 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHKAP35790 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHKAP35790 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.67■□□□□ 0.9
CHKAP35790 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.67■□□□□ 0.9
CHKAP35790 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHKAP35790 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 AC239809.2-201ENST00000415381 517 ntBASIC20.67■□□□□ 0.9
CHKAP35790 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.67■□□□□ 0.9
CHKAP35790 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.67■□□□□ 0.9
CHKAP35790 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 AC008550.1-201ENST00000511500 884 ntBASIC20.67■□□□□ 0.9
CHKAP35790 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHKAP35790 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.67■□□□□ 0.9
CHKAP35790 AL031963.3-201ENST00000606441 850 ntBASIC20.67■□□□□ 0.9
CHKAP35790 AL121829.2-201ENST00000620908 328 ntBASIC20.67■□□□□ 0.9
CHKAP35790 AL023875.1-201ENST00000640777 796 ntBASIC20.67■□□□□ 0.9
CHKAP35790 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CHKAP35790 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHKAP35790 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.67■□□□□ 0.9
CHKAP35790 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHKAP35790 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CHKAP35790 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.66■□□□□ 0.9
CHKAP35790 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.66■□□□□ 0.9
CHKAP35790 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.66■□□□□ 0.9
CHKAP35790 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.66■□□□□ 0.9
CHKAP35790 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.66■□□□□ 0.9
CHKAP35790 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.66■□□□□ 0.9
CHKAP35790 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHKAP35790 AC124016.1-201ENST00000609552 612 ntBASIC20.66■□□□□ 0.9
CHKAP35790 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.66■□□□□ 0.9
CHKAP35790 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.66■□□□□ 0.9
CHKAP35790 AC018445.3-201ENST00000624177 1945 ntBASIC20.66■□□□□ 0.9
CHKAP35790 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.66■□□□□ 0.9
CHKAP35790 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.66■□□□□ 0.9
CHKAP35790 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.66■□□□□ 0.9
CHKAP35790 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHKAP35790 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.65■□□□□ 0.9
CHKAP35790 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.65■□□□□ 0.9
CHKAP35790 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHKAP35790 MIR718-201ENST00000390190 70 ntBASIC20.65■□□□□ 0.9
CHKAP35790 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CHKAP35790 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.65■□□□□ 0.9
CHKAP35790 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CHKAP35790 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHKAP35790 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CHKAP35790 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHKAP35790 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHKAP35790 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHKAP35790 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms