Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC116562.4-201ENST00000641316 2276 ntBASIC20.64■□□□□ 0.89
RFC1P35251 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RFC1P35251 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC1P35251 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RFC1P35251 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.64■□□□□ 0.89
RFC1P35251 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC1P35251 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.64■□□□□ 0.89
RFC1P35251 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
RFC1P35251 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RFC1P35251 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC1P35251 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC1P35251 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC1P35251 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC1P35251 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC1P35251 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.64■□□□□ 0.89
RFC1P35251 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC1P35251 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RFC1P35251 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RFC1P35251 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.63■□□□□ 0.89
RFC1P35251 RNA5SP413-201ENST00000516373 109 ntBASIC20.63■□□□□ 0.89
RFC1P35251 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.63■□□□□ 0.89
RFC1P35251 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC1P35251 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RFC1P35251 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.63■□□□□ 0.89
RFC1P35251 AC008403.3-201ENST00000598924 454 ntBASIC20.63■□□□□ 0.89
RFC1P35251 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.63■□□□□ 0.89
RFC1P35251 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RFC1P35251 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.63■□□□□ 0.89
RFC1P35251 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC1P35251 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC1P35251 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RFC1P35251 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC1P35251 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RFC1P35251 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.62■□□□□ 0.89
RFC1P35251 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC1P35251 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC1P35251 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.62■□□□□ 0.89
RFC1P35251 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC1P35251 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.62■□□□□ 0.89
RFC1P35251 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
RFC1P35251 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC1P35251 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC1P35251 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.61■□□□□ 0.89
RFC1P35251 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC1P35251 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC1P35251 KRT18P6-201ENST00000555540 1265 ntBASIC20.61■□□□□ 0.89
RFC1P35251 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC1P35251 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC1P35251 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.61■□□□□ 0.89
RFC1P35251 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC1P35251 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC1P35251 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RFC1P35251 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC1P35251 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC1P35251 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFC1P35251 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC1P35251 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RFC1P35251 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.6■□□□□ 0.89
RFC1P35251 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.6■□□□□ 0.89
RFC1P35251 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.6■□□□□ 0.89
RFC1P35251 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.6■□□□□ 0.89
RFC1P35251 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 AC093484.2-201ENST00000580996 2166 ntBASIC20.6■□□□□ 0.89
RFC1P35251 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.6■□□□□ 0.89
RFC1P35251 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
RFC1P35251 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RFC1P35251 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC1P35251 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.59■□□□□ 0.89
RFC1P35251 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RFC1P35251 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC1P35251 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.59■□□□□ 0.89
RFC1P35251 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RFC1P35251 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC1P35251 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC1P35251 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms