Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.71■■□□□ 1.55
RFC4P35249 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC24.71■■□□□ 1.55
RFC4P35249 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
RFC4P35249 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.71■■□□□ 1.55
RFC4P35249 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.71■■□□□ 1.55
RFC4P35249 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RFC4P35249 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
RFC4P35249 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RFC4P35249 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.7■■□□□ 1.54
RFC4P35249 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RFC4P35249 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.7■■□□□ 1.54
RFC4P35249 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RFC4P35249 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.7■■□□□ 1.54
RFC4P35249 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.7■■□□□ 1.54
RFC4P35249 CA15P1-201ENST00000481698 905 ntBASIC24.7■■□□□ 1.54
RFC4P35249 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.7■■□□□ 1.54
RFC4P35249 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.7■■□□□ 1.54
RFC4P35249 PRSS44-201ENST00000515154 1146 ntBASIC24.7■■□□□ 1.54
RFC4P35249 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.7■■□□□ 1.54
RFC4P35249 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RFC4P35249 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RFC4P35249 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.7■■□□□ 1.54
RFC4P35249 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RFC4P35249 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RFC4P35249 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RFC4P35249 KRT8P8-201ENST00000434750 1448 ntBASIC24.69■■□□□ 1.54
RFC4P35249 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.69■■□□□ 1.54
RFC4P35249 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RFC4P35249 AC092720.2-201ENST00000602388 1665 ntBASIC24.69■■□□□ 1.54
RFC4P35249 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RFC4P35249 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RFC4P35249 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.69■■□□□ 1.54
RFC4P35249 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RFC4P35249 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
RFC4P35249 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RFC4P35249 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.69■■□□□ 1.54
RFC4P35249 ETFA-216ENST00000560726 942 ntTSL 3 BASIC24.69■■□□□ 1.54
RFC4P35249 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.69■■□□□ 1.54
RFC4P35249 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
RFC4P35249 AC008622.2-201ENST00000617006 1229 ntBASIC24.69■■□□□ 1.54
RFC4P35249 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RFC4P35249 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.69■■□□□ 1.54
RFC4P35249 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RFC4P35249 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RFC4P35249 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RFC4P35249 AL117328.2-201ENST00000624617 1940 ntBASIC24.69■■□□□ 1.54
RFC4P35249 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RFC4P35249 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RFC4P35249 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RFC4P35249 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RFC4P35249 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RFC4P35249 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
RFC4P35249 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RFC4P35249 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.68■■□□□ 1.54
RFC4P35249 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC24.68■■□□□ 1.54
RFC4P35249 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.68■■□□□ 1.54
RFC4P35249 CLEC4GP1-201ENST00000596555 870 ntBASIC24.68■■□□□ 1.54
RFC4P35249 NDUFV2-AS1-203ENST00000608008 779 ntBASIC24.68■■□□□ 1.54
RFC4P35249 AC069148.1-201ENST00000608741 768 ntBASIC24.68■■□□□ 1.54
RFC4P35249 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.68■■□□□ 1.54
RFC4P35249 AC006128.1-201ENST00000624704 1661 ntBASIC24.68■■□□□ 1.54
RFC4P35249 AC007225.1-201ENST00000566331 1836 ntBASIC24.68■■□□□ 1.54
RFC4P35249 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RFC4P35249 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFC4P35249 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RFC4P35249 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RFC4P35249 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RFC4P35249 KRT18P38-201ENST00000449496 1282 ntBASIC24.67■■□□□ 1.54
RFC4P35249 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.67■■□□□ 1.54
RFC4P35249 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.67■■□□□ 1.54
RFC4P35249 AL160286.2-201ENST00000567150 934 ntBASIC24.67■■□□□ 1.54
RFC4P35249 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.67■■□□□ 1.54
RFC4P35249 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.67■■□□□ 1.54
RFC4P35249 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFC4P35249 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFC4P35249 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RFC4P35249 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RFC4P35249 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RFC4P35249 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RFC4P35249 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RFC4P35249 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.66■■□□□ 1.54
RFC4P35249 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
RFC4P35249 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RFC4P35249 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.66■■□□□ 1.54
RFC4P35249 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RFC4P35249 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.66■■□□□ 1.54
RFC4P35249 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.66■■□□□ 1.54
RFC4P35249 AP003041.3-201ENST00000527151 707 ntBASIC24.66■■□□□ 1.54
RFC4P35249 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RFC4P35249 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RFC4P35249 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.66■■□□□ 1.54
RFC4P35249 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RFC4P35249 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 AF106564.1-201ENST00000607058 2553 ntBASIC24.65■■□□□ 1.54
RFC4P35249 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
RFC4P35249 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RFC4P35249 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RFC4P35249 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms