Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MMP11P24347 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MMP11P24347 TSPY7P-201ENST00000431358 1114 ntBASIC18.61■□□□□ 0.57
MMP11P24347 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP11P24347 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP11P24347 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
MMP11P24347 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP11P24347 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP11P24347 MIR4785-201ENST00000585005 73 ntBASIC18.61■□□□□ 0.57
MMP11P24347 AC004264.1-201ENST00000608354 794 ntBASIC18.61■□□□□ 0.57
MMP11P24347 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.61■□□□□ 0.57
MMP11P24347 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MMP11P24347 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MMP11P24347 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.6■□□□□ 0.57
MMP11P24347 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.6■□□□□ 0.57
MMP11P24347 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP11P24347 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
MMP11P24347 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 SMG8-203ENST00000578922 2178 ntBASIC18.6■□□□□ 0.57
MMP11P24347 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 AL353807.1-201ENST00000427475 662 ntBASIC18.6■□□□□ 0.57
MMP11P24347 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.6■□□□□ 0.57
MMP11P24347 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.6■□□□□ 0.57
MMP11P24347 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
MMP11P24347 AC073912.3-201ENST00000624414 853 ntBASIC18.6■□□□□ 0.57
MMP11P24347 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MMP11P24347 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MMP11P24347 DPP3P2-201ENST00000416030 1696 ntBASIC18.6■□□□□ 0.57
MMP11P24347 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP11P24347 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP11P24347 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP11P24347 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP11P24347 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP11P24347 HTR7P1-201ENST00000538670 1336 ntBASIC18.59■□□□□ 0.57
MMP11P24347 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP11P24347 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP11P24347 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP11P24347 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
MMP11P24347 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP11P24347 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.59■□□□□ 0.57
MMP11P24347 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.59■□□□□ 0.57
MMP11P24347 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.59■□□□□ 0.57
MMP11P24347 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.59■□□□□ 0.57
MMP11P24347 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP11P24347 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP11P24347 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP11P24347 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP11P24347 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP11P24347 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP11P24347 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP11P24347 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP11P24347 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP11P24347 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.58■□□□□ 0.57
MMP11P24347 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.58■□□□□ 0.57
MMP11P24347 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP11P24347 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP11P24347 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MMP11P24347 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP11P24347 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP11P24347 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.58■□□□□ 0.56
MMP11P24347 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP11P24347 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP11P24347 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
MMP11P24347 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MMP11P24347 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
MMP11P24347 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.58■□□□□ 0.56
MMP11P24347 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MMP11P24347 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
MMP11P24347 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MMP11P24347 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.58■□□□□ 0.56
MMP11P24347 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.58■□□□□ 0.56
MMP11P24347 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.58■□□□□ 0.56
MMP11P24347 AF186192.3-201ENST00000583427 947 ntBASIC18.58■□□□□ 0.56
MMP11P24347 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.58■□□□□ 0.56
MMP11P24347 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP11P24347 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP11P24347 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
MMP11P24347 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP11P24347 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP11P24347 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP11P24347 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.58■□□□□ 0.56
MMP11P24347 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.58■□□□□ 0.56
MMP11P24347 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MMP11P24347 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MMP11P24347 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP11P24347 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.57■□□□□ 0.56
MMP11P24347 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms