Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL1P22362 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCL1P22362 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCL1P22362 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL1P22362 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL1P22362 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL1P22362 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCL1P22362 AC006970.2-201ENST00000450065 779 ntBASIC16.86■□□□□ 0.29
CCL1P22362 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.86■□□□□ 0.29
CCL1P22362 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCL1P22362 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL1P22362 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL1P22362 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL1P22362 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCL1P22362 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 AC141586.3-201ENST00000562166 1838 ntBASIC16.86■□□□□ 0.29
CCL1P22362 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL1P22362 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL1P22362 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL1P22362 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCL1P22362 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 RPS2P52-201ENST00000469610 820 ntBASIC16.85■□□□□ 0.29
CCL1P22362 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.85■□□□□ 0.29
CCL1P22362 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL1P22362 MYC-209ENST00000641252 345 ntBASIC16.85■□□□□ 0.29
CCL1P22362 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL1P22362 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CCL1P22362 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL1P22362 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCL1P22362 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL1P22362 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCL1P22362 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCL1P22362 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCL1P22362 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL1P22362 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCL1P22362 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCL1P22362 TSPY6P-201ENST00000448518 926 ntBASIC16.84■□□□□ 0.29
CCL1P22362 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL1P22362 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.84■□□□□ 0.29
CCL1P22362 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.84■□□□□ 0.29
CCL1P22362 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 AC006557.6-201ENST00000623071 864 ntBASIC16.84■□□□□ 0.29
CCL1P22362 HLA-B-256ENST00000639848 1089 ntBASIC16.84■□□□□ 0.29
CCL1P22362 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL1P22362 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCL1P22362 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL1P22362 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 AC124283.5-201ENST00000624661 1809 ntBASIC16.84■□□□□ 0.29
CCL1P22362 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL1P22362 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL1P22362 AC004408.2-201ENST00000623613 2777 ntBASIC16.83■□□□□ 0.29
CCL1P22362 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCL1P22362 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CCL1P22362 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL1P22362 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms