Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PGK1P00558 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGK1P00558 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PGK1P00558 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGK1P00558 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.86■■□□□ 1.09
PGK1P00558 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGK1P00558 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.86■■□□□ 1.09
PGK1P00558 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
PGK1P00558 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
PGK1P00558 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.86■■□□□ 1.09
PGK1P00558 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PGK1P00558 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
PGK1P00558 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.86■■□□□ 1.09
PGK1P00558 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.86■■□□□ 1.09
PGK1P00558 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.86■■□□□ 1.09
PGK1P00558 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.86■■□□□ 1.09
PGK1P00558 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.86■■□□□ 1.09
PGK1P00558 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.86■■□□□ 1.09
PGK1P00558 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGK1P00558 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGK1P00558 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGK1P00558 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGK1P00558 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.86■■□□□ 1.09
PGK1P00558 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.86■■□□□ 1.09
PGK1P00558 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PGK1P00558 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.85■■□□□ 1.09
PGK1P00558 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.85■■□□□ 1.09
PGK1P00558 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.85■■□□□ 1.09
PGK1P00558 AL023803.3-201ENST00000615559 522 ntBASIC21.85■■□□□ 1.09
PGK1P00558 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.85■■□□□ 1.09
PGK1P00558 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 SMG8-203ENST00000578922 2178 ntBASIC21.85■■□□□ 1.09
PGK1P00558 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.85■■□□□ 1.09
PGK1P00558 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGK1P00558 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGK1P00558 TMEM179-206ENST00000616017 1645 ntBASIC21.84■■□□□ 1.09
PGK1P00558 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.84■■□□□ 1.09
PGK1P00558 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PGK1P00558 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.84■■□□□ 1.09
PGK1P00558 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGK1P00558 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGK1P00558 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGK1P00558 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PGK1P00558 PCED1CP-201ENST00000419887 785 ntBASIC21.84■■□□□ 1.09
PGK1P00558 AC009947.2-201ENST00000444014 672 ntBASIC21.84■■□□□ 1.09
PGK1P00558 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.84■■□□□ 1.09
PGK1P00558 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PGK1P00558 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGK1P00558 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGK1P00558 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGK1P00558 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PGK1P00558 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PGK1P00558 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.83■■□□□ 1.09
PGK1P00558 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PGK1P00558 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.83■■□□□ 1.09
PGK1P00558 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.83■■□□□ 1.09
PGK1P00558 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
PGK1P00558 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.83■■□□□ 1.09
PGK1P00558 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.83■■□□□ 1.09
PGK1P00558 FAM86EP-206ENST00000510506 987 ntBASIC21.83■■□□□ 1.09
PGK1P00558 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.83■■□□□ 1.09
PGK1P00558 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.83■■□□□ 1.09
PGK1P00558 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.83■■□□□ 1.09
PGK1P00558 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.83■■□□□ 1.09
PGK1P00558 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PGK1P00558 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.83■■□□□ 1.09
PGK1P00558 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PGK1P00558 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PGK1P00558 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PGK1P00558 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PGK1P00558 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PGK1P00558 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PGK1P00558 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.82■■□□□ 1.08
PGK1P00558 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.82■■□□□ 1.08
PGK1P00558 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PGK1P00558 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGK1P00558 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGK1P00558 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.82■■□□□ 1.08
PGK1P00558 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.82■■□□□ 1.08
PGK1P00558 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.82■■□□□ 1.08
PGK1P00558 KRT126P-201ENST00000549467 1181 ntBASIC21.82■■□□□ 1.08
PGK1P00558 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.82■■□□□ 1.08
PGK1P00558 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
PGK1P00558 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGK1P00558 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PGK1P00558 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGK1P00558 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGK1P00558 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PGK1P00558 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PGK1P00558 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms