Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.08■□□□□ 0.8
MT-CO1P00395 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MT-CO1P00395 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
MT-CO1P00395 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MT-CO1P00395 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
MT-CO1P00395 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
MT-CO1P00395 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MT-CO1P00395 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MT-CO1P00395 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.08■□□□□ 0.8
MT-CO1P00395 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MT-CO1P00395 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.07■□□□□ 0.8
MT-CO1P00395 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.07■□□□□ 0.8
MT-CO1P00395 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.07■□□□□ 0.8
MT-CO1P00395 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.07■□□□□ 0.8
MT-CO1P00395 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 RPS2P55-201ENST00000397318 883 ntBASIC20.07■□□□□ 0.8
MT-CO1P00395 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 KRT16P5-201ENST00000455284 522 ntBASIC20.07■□□□□ 0.8
MT-CO1P00395 AC107956.1-201ENST00000494359 873 ntBASIC20.07■□□□□ 0.8
MT-CO1P00395 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.07■□□□□ 0.8
MT-CO1P00395 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.07■□□□□ 0.8
MT-CO1P00395 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.07■□□□□ 0.8
MT-CO1P00395 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.07■□□□□ 0.8
MT-CO1P00395 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
MT-CO1P00395 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MT-CO1P00395 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.07■□□□□ 0.8
MT-CO1P00395 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.07■□□□□ 0.8
MT-CO1P00395 AP006587.1-201ENST00000534129 1502 ntBASIC20.07■□□□□ 0.8
MT-CO1P00395 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MT-CO1P00395 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
MT-CO1P00395 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.06■□□□□ 0.8
MT-CO1P00395 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MT-CO1P00395 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.06■□□□□ 0.8
MT-CO1P00395 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.06■□□□□ 0.8
MT-CO1P00395 AC233702.5-201ENST00000584107 538 ntBASIC20.06■□□□□ 0.8
MT-CO1P00395 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MT-CO1P00395 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
MT-CO1P00395 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MT-CO1P00395 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MT-CO1P00395 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.06■□□□□ 0.8
MT-CO1P00395 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.05■□□□□ 0.8
MT-CO1P00395 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.05■□□□□ 0.8
MT-CO1P00395 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
MT-CO1P00395 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
MT-CO1P00395 MIR718-201ENST00000390190 70 ntBASIC20.05■□□□□ 0.8
MT-CO1P00395 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.05■□□□□ 0.8
MT-CO1P00395 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MT-CO1P00395 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 RARRES2P10-201ENST00000564312 460 ntBASIC20.05■□□□□ 0.8
MT-CO1P00395 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.05■□□□□ 0.8
MT-CO1P00395 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.05■□□□□ 0.8
MT-CO1P00395 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MT-CO1P00395 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MT-CO1P00395 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.05■□□□□ 0.8
MT-CO1P00395 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.04■□□□□ 0.8
MT-CO1P00395 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO1P00395 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO1P00395 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MT-CO1P00395 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO1P00395 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.04■□□□□ 0.8
MT-CO1P00395 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO1P00395 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.04■□□□□ 0.8
MT-CO1P00395 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO1P00395 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO1P00395 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MT-CO1P00395 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MT-CO1P00395 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
MT-CO1P00395 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms