Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.43■■□□□ 1.18
ALDH1A1P00352 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
ALDH1A1P00352 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ALDH1A1P00352 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ALDH1A1P00352 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.43■■□□□ 1.18
ALDH1A1P00352 KRT8P8-201ENST00000434750 1448 ntBASIC22.43■■□□□ 1.18
ALDH1A1P00352 C9orf163-202ENST00000624034 2573 ntBASIC22.43■■□□□ 1.18
ALDH1A1P00352 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.43■■□□□ 1.18
ALDH1A1P00352 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ALDH1A1P00352 GCSHP2-201ENST00000560971 527 ntBASIC22.43■■□□□ 1.18
ALDH1A1P00352 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
ALDH1A1P00352 AL121603.2-201ENST00000557373 2117 ntBASIC22.43■■□□□ 1.18
ALDH1A1P00352 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ALDH1A1P00352 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ALDH1A1P00352 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.43■■□□□ 1.18
ALDH1A1P00352 DPP3P2-201ENST00000416030 1696 ntBASIC22.42■■□□□ 1.18
ALDH1A1P00352 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ALDH1A1P00352 AC005229.4-201ENST00000610085 2198 ntBASIC22.42■■□□□ 1.18
ALDH1A1P00352 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ALDH1A1P00352 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ALDH1A1P00352 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ALDH1A1P00352 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ALDH1A1P00352 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
ALDH1A1P00352 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.42■■□□□ 1.18
ALDH1A1P00352 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
ALDH1A1P00352 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.42■■□□□ 1.18
ALDH1A1P00352 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
ALDH1A1P00352 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.42■■□□□ 1.18
ALDH1A1P00352 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ALDH1A1P00352 AC023511.2-201ENST00000618803 211 ntBASIC22.42■■□□□ 1.18
ALDH1A1P00352 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.42■■□□□ 1.18
ALDH1A1P00352 AL049796.1-201ENST00000565336 1766 ntBASIC22.42■■□□□ 1.18
ALDH1A1P00352 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.42■■□□□ 1.18
ALDH1A1P00352 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
ALDH1A1P00352 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ALDH1A1P00352 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.41■■□□□ 1.18
ALDH1A1P00352 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC22.41■■□□□ 1.18
ALDH1A1P00352 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ALDH1A1P00352 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ALDH1A1P00352 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC22.41■■□□□ 1.18
ALDH1A1P00352 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC22.41■■□□□ 1.18
ALDH1A1P00352 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC22.41■■□□□ 1.18
ALDH1A1P00352 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
ALDH1A1P00352 TMEM179-206ENST00000616017 1645 ntBASIC22.41■■□□□ 1.18
ALDH1A1P00352 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
ALDH1A1P00352 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ALDH1A1P00352 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.4■■□□□ 1.18
ALDH1A1P00352 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
ALDH1A1P00352 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.4■■□□□ 1.18
ALDH1A1P00352 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.4■■□□□ 1.18
ALDH1A1P00352 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.4■■□□□ 1.18
ALDH1A1P00352 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.4■■□□□ 1.18
ALDH1A1P00352 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.4■■□□□ 1.18
ALDH1A1P00352 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.4■■□□□ 1.18
ALDH1A1P00352 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ALDH1A1P00352 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ALDH1A1P00352 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.39■■□□□ 1.18
ALDH1A1P00352 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ALDH1A1P00352 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ALDH1A1P00352 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
ALDH1A1P00352 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ALDH1A1P00352 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.39■■□□□ 1.17
ALDH1A1P00352 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ALDH1A1P00352 CALM1-205ENST00000553542 877 ntTSL 5 BASIC22.39■■□□□ 1.17
ALDH1A1P00352 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.39■■□□□ 1.17
ALDH1A1P00352 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
ALDH1A1P00352 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
ALDH1A1P00352 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
ALDH1A1P00352 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ALDH1A1P00352 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
ALDH1A1P00352 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ALDH1A1P00352 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ALDH1A1P00352 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.38■■□□□ 1.17
ALDH1A1P00352 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ALDH1A1P00352 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ALDH1A1P00352 AL645929.1-201ENST00000420084 975 ntBASIC22.38■■□□□ 1.17
ALDH1A1P00352 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.38■■□□□ 1.17
ALDH1A1P00352 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.38■■□□□ 1.17
ALDH1A1P00352 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
ALDH1A1P00352 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.38■■□□□ 1.17
ALDH1A1P00352 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.38■■□□□ 1.17
ALDH1A1P00352 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms