Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 GABARAPL3-202ENST00000624044 1851 ntBASIC30.65■■■□□ 2.5
PCF11O94913 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
PCF11O94913 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC30.65■■■□□ 2.5
PCF11O94913 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
PCF11O94913 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC30.65■■■□□ 2.5
PCF11O94913 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.65■■■□□ 2.5
PCF11O94913 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.65■■■□□ 2.5
PCF11O94913 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC30.65■■■□□ 2.5
PCF11O94913 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
PCF11O94913 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PCF11O94913 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PCF11O94913 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PCF11O94913 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC30.64■■■□□ 2.5
PCF11O94913 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PCF11O94913 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PCF11O94913 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PCF11O94913 HIST1H2APS4-201ENST00000362070 348 ntBASIC30.64■■■□□ 2.5
PCF11O94913 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PCF11O94913 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC30.64■■■□□ 2.5
PCF11O94913 EGLN1P1-201ENST00000531623 762 ntBASIC30.64■■■□□ 2.5
PCF11O94913 SLC25A1P4-201ENST00000567977 778 ntBASIC30.64■■■□□ 2.5
PCF11O94913 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
PCF11O94913 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC30.64■■■□□ 2.5
PCF11O94913 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.64■■■□□ 2.5
PCF11O94913 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PCF11O94913 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PCF11O94913 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
PCF11O94913 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
PCF11O94913 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.49
PCF11O94913 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
PCF11O94913 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 KRT8P41-201ENST00000533985 1514 ntBASIC30.63■■■□□ 2.49
PCF11O94913 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC30.63■■■□□ 2.49
PCF11O94913 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC30.63■■■□□ 2.49
PCF11O94913 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 GOLGA2P11-201ENST00000562660 1621 ntBASIC30.63■■■□□ 2.49
PCF11O94913 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
PCF11O94913 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCF11O94913 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC30.63■■■□□ 2.49
PCF11O94913 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCF11O94913 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCF11O94913 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCF11O94913 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PCF11O94913 KRT126P-201ENST00000549467 1181 ntBASIC30.62■■■□□ 2.49
PCF11O94913 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC30.62■■■□□ 2.49
PCF11O94913 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PCF11O94913 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCF11O94913 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC30.62■■■□□ 2.49
PCF11O94913 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
PCF11O94913 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC30.62■■■□□ 2.49
PCF11O94913 UPK3BP1-201ENST00000428678 509 ntBASIC30.62■■■□□ 2.49
PCF11O94913 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PCF11O94913 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC30.62■■■□□ 2.49
PCF11O94913 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCF11O94913 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
PCF11O94913 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC30.61■■■□□ 2.49
PCF11O94913 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC30.61■■■□□ 2.49
PCF11O94913 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCF11O94913 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC30.61■■■□□ 2.49
PCF11O94913 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCF11O94913 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PCF11O94913 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PCF11O94913 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC30.61■■■□□ 2.49
PCF11O94913 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCF11O94913 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCF11O94913 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PCF11O94913 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
PCF11O94913 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
PCF11O94913 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PCF11O94913 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PCF11O94913 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PCF11O94913 AL137013.1-201ENST00000432946 1228 ntBASIC30.6■■■□□ 2.49
PCF11O94913 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC30.6■■■□□ 2.49
PCF11O94913 AC022616.7-201ENST00000525383 220 ntBASIC30.6■■■□□ 2.49
PCF11O94913 WWOX-216ENST00000569818 525 ntBASIC30.6■■■□□ 2.49
PCF11O94913 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC30.6■■■□□ 2.49
PCF11O94913 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PCF11O94913 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PCF11O94913 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCF11O94913 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCF11O94913 LGALS8-AS1-201ENST00000487567 1457 ntBASIC30.59■■■□□ 2.49
PCF11O94913 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCF11O94913 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.59■■■□□ 2.49
PCF11O94913 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC30.59■■■□□ 2.49
PCF11O94913 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PCF11O94913 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.59■■■□□ 2.49
PCF11O94913 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC30.59■■■□□ 2.49
PCF11O94913 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC30.59■■■□□ 2.49
PCF11O94913 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCF11O94913 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC30.59■■■□□ 2.49
PCF11O94913 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PCF11O94913 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC30.58■■■□□ 2.49
PCF11O94913 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms