Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 EML2-202ENST00000399594 2232 ntTSL 220.42■□□□□ 0.862e-11■■■■■ 137.9
SF3B1O75533 TMEM234-204ENST00000461402 1866 ntTSL 1 (best)20.4■□□□□ 0.863e-6■■■■■ 137.9
SF3B1O75533 STX18-AS1-203ENST00000507244 669 ntTSL 220.39■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 EML2-215ENST00000588308 2062 ntTSL 220.39■□□□□ 0.852e-11■■■■■ 137.9
SF3B1O75533 XPO6-213ENST00000568065 942 ntTSL 520.38■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 BID-208ENST00000550946 1394 ntTSL 1 (best)20.38■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.37■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 ISCU-207ENST00000539580 1169 ntTSL 1 (best)20.37■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.37■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 TSPAN32-216ENST00000498313 988 ntTSL 520.35■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 TNIP1-207ENST00000520695 658 ntTSL 420.33■□□□□ 0.853e-6■■■■■ 137.9
SF3B1O75533 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.842e-11■■■■■ 137.9
SF3B1O75533 VPS16-204ENST00000417508 819 ntTSL 520.28■□□□□ 0.843e-6■■■■■ 137.9
SF3B1O75533 CTDSP2-207ENST00000551594 900 ntTSL 320.27■□□□□ 0.833e-6■■■■■ 137.9
SF3B1O75533 LTBP2-206ENST00000557425 582 ntTSL 220.26■□□□□ 0.833e-6■■■■■ 137.9
SF3B1O75533 BTBD11-207ENST00000550706 667 ntTSL 520.26■□□□□ 0.833e-6■■■■■ 137.9
SF3B1O75533 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.833e-6■■■■■ 137.9
SF3B1O75533 C1orf61-207ENST00000463309 685 ntTSL 320.24■□□□□ 0.833e-6■■■■■ 137.9
SF3B1O75533 LMNA-204ENST00000368298 1475 ntTSL 1 (best)20.22■□□□□ 0.833e-6■■■■■ 137.9
SF3B1O75533 SH3TC1-217ENST00000509119 509 ntTSL 320.22■□□□□ 0.833e-6■■■■■ 137.9
SF3B1O75533 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.833e-6■■■■■ 137.9
SF3B1O75533 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.833e-6■■■■■ 137.9
SF3B1O75533 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.823e-6■■■■■ 137.9
SF3B1O75533 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.823e-6■■■■■ 137.9
SF3B1O75533 TMEM39B-204ENST00000466321 770 ntTSL 520.12■□□□□ 0.813e-6■■■■■ 137.9
SF3B1O75533 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.813e-6■■■■■ 137.9
SF3B1O75533 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.09■□□□□ 0.813e-6■■■■■ 137.9
SF3B1O75533 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.83e-6■■■■■ 137.9
SF3B1O75533 TIAL1-210ENST00000479729 485 ntTSL 320.06■□□□□ 0.83e-6■■■■■ 137.9
SF3B1O75533 ST3GAL4-220ENST00000534733 545 ntTSL 520.04■□□□□ 0.83e-6■■■■■ 137.9
SF3B1O75533 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.04■□□□□ 0.83e-6■■■■■ 137.9
SF3B1O75533 SNX17-203ENST00000440760 1955 ntTSL 1 (best)20.04■□□□□ 0.83e-6■■■■■ 137.9
SF3B1O75533 MFSD9-202ENST00000411991 1183 ntTSL 1 (best)20.03■□□□□ 0.83e-6■■■■■ 137.9
SF3B1O75533 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.01■□□□□ 0.798e-7■■■■■ 137.9
SF3B1O75533 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.793e-6■■■■■ 137.9
SF3B1O75533 EHD2-203ENST00000540884 1215 ntTSL 219.98■□□□□ 0.793e-6■■■■■ 137.9
SF3B1O75533 PALM-206ENST00000589012 579 ntTSL 319.96■□□□□ 0.793e-6■■■■■ 137.9
SF3B1O75533 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.783e-6■■■■■ 137.9
SF3B1O75533 ISCU-213ENST00000552072 738 ntTSL 219.94■□□□□ 0.783e-6■■■■■ 137.9
SF3B1O75533 ESPN-214ENST00000633239 1494 ntTSL 519.94■□□□□ 0.781e-16■■■■■ 137.9
SF3B1O75533 SNX17-202ENST00000427123 2007 ntTSL 219.91■□□□□ 0.783e-6■■■■■ 137.9
SF3B1O75533 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.783e-6■■■■■ 137.9
SF3B1O75533 ACAP1-207ENST00000573893 593 ntTSL 319.87■□□□□ 0.773e-6■■■■■ 137.9
SF3B1O75533 EXTL3-205ENST00000519288 474 ntTSL 319.87■□□□□ 0.773e-6■■■■■ 137.9
SF3B1O75533 TMEM223-204ENST00000528367 857 ntTSL 219.87■□□□□ 0.773e-6■■■■■ 137.9
SF3B1O75533 TSPAN32-215ENST00000493948 641 ntTSL 319.86■□□□□ 0.773e-6■■■■■ 137.9
SF3B1O75533 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.84■□□□□ 0.773e-6■■■■■ 137.9
SF3B1O75533 ESPN-217ENST00000636644 544 ntTSL 519.82■□□□□ 0.761e-16■■■■■ 137.9
SF3B1O75533 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.81■□□□□ 0.768e-8■■■■■ 137.9
SF3B1O75533 UBAC2-204ENST00000457666 627 ntTSL 319.79■□□□□ 0.763e-6■■■■■ 137.9
SF3B1O75533 PDHA1-207ENST00000423505 731 ntTSL 219.78■□□□□ 0.763e-6■■■■■ 137.9
SF3B1O75533 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.762e-8■■■■■ 137.9
SF3B1O75533 PPP2R3B-209ENST00000484364 732 ntTSL 219.77■□□□□ 0.763e-6■■■■■ 137.9
SF3B1O75533 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.753e-6■■■■■ 137.9
SF3B1O75533 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.75■□□□□ 0.753e-6■■■■■ 137.9
SF3B1O75533 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.753e-6■■■■■ 137.9
SF3B1O75533 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.75■□□□□ 0.753e-6■■■■■ 137.9
SF3B1O75533 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.75■□□□□ 0.753e-6■■■■■ 137.9
SF3B1O75533 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.753e-6■■■■■ 137.9
SF3B1O75533 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.753e-6■■■■■ 137.9
SF3B1O75533 MAEA-209ENST00000506530 5371 ntTSL 219.72■□□□□ 0.753e-6■■■■■ 137.9
SF3B1O75533 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.72■□□□□ 0.753e-6■■■■■ 137.9
SF3B1O75533 TALDO1-208ENST00000532685 568 ntTSL 219.71■□□□□ 0.752e-11■■■■■ 137.9
SF3B1O75533 PANX2-203ENST00000402472 2291 ntTSL 219.69■□□□□ 0.743e-6■■■■■ 137.9
SF3B1O75533 INVS-205ENST00000466647 767 ntTSL 319.69■□□□□ 0.743e-6■■■■■ 137.9
SF3B1O75533 ABCB8-213ENST00000482309 1994 ntTSL 219.69■□□□□ 0.743e-6■■■■■ 137.9
SF3B1O75533 KIAA0319L-209ENST00000470388 872 ntTSL 519.68■□□□□ 0.743e-6■■■■■ 137.9
SF3B1O75533 LRCH1-204ENST00000443945 2070 ntTSL 1 (best)19.68■□□□□ 0.743e-6■■■■■ 137.9
SF3B1O75533 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.743e-6■■■■■ 137.9
SF3B1O75533 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.59■□□□□ 0.731e-16■■■■■ 137.9
SF3B1O75533 SLC41A2-203ENST00000415674 702 ntTSL 219.58■□□□□ 0.733e-6■■■■■ 137.9
SF3B1O75533 SLC41A2-205ENST00000424946 590 ntTSL 419.58■□□□□ 0.733e-6■■■■■ 137.9
SF3B1O75533 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.723e-6■■■■■ 137.9
SF3B1O75533 SNRPB-203ENST00000474384 985 ntTSL 519.57■□□□□ 0.723e-6■■■■■ 137.9
SF3B1O75533 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.723e-6■■■■■ 137.9
SF3B1O75533 AHRR-210ENST00000514523 563 ntTSL 419.54■□□□□ 0.723e-6■■■■■ 137.9
SF3B1O75533 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.723e-6■■■■■ 137.9
SF3B1O75533 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.53■□□□□ 0.723e-6■■■■■ 137.9
SF3B1O75533 ABI2-208ENST00000416001 1087 ntTSL 219.52■□□□□ 0.723e-6■■■■■ 137.9
SF3B1O75533 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.713e-6■■■■■ 137.9
SF3B1O75533 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.713e-6■■■■■ 137.9
SF3B1O75533 FOXN3-204ENST00000553840 555 ntTSL 419.46■□□□□ 0.713e-6■■■■■ 137.9
SF3B1O75533 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.45■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.45■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 BACH2-204ENST00000453877 868 ntTSL 519.44■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 BACH2-203ENST00000406998 780 ntTSL 219.44■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 BACH2-205ENST00000470301 618 ntTSL 319.44■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 BACH2-209ENST00000494747 540 ntTSL 319.44■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 C1orf61-208ENST00000464203 766 ntTSL 519.43■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 UBE2Q1-207ENST00000497453 830 ntTSL 519.43■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.4■□□□□ 0.73e-6■■■■■ 137.9
SF3B1O75533 PRR14-211ENST00000568754 856 ntTSL 319.38■□□□□ 0.693e-6■■■■■ 137.9
SF3B1O75533 TFR2-211ENST00000475011 610 ntTSL 219.37■□□□□ 0.693e-6■■■■■ 137.9
SF3B1O75533 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.693e-6■■■■■ 137.9
SF3B1O75533 SLC41A2-207ENST00000433540 685 ntTSL 419.34■□□□□ 0.693e-6■■■■■ 137.9
SF3B1O75533 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.693e-6■■■■■ 137.9
Retrieved 100 of 46,956 protein–RNA pairs in 1206.6 ms