Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PLOD3O60568 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PLOD3O60568 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PLOD3O60568 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.44■□□□□ 0.54
PLOD3O60568 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.44■□□□□ 0.54
PLOD3O60568 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PLOD3O60568 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PLOD3O60568 UNC93B5-201ENST00000530315 699 ntBASIC18.44■□□□□ 0.54
PLOD3O60568 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PLOD3O60568 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PLOD3O60568 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.44■□□□□ 0.54
PLOD3O60568 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.44■□□□□ 0.54
PLOD3O60568 SOX15-203ENST00000570788 1093 ntBASIC18.44■□□□□ 0.54
PLOD3O60568 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PLOD3O60568 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PLOD3O60568 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.44■□□□□ 0.54
PLOD3O60568 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PLOD3O60568 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.44■□□□□ 0.54
PLOD3O60568 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.44■□□□□ 0.54
PLOD3O60568 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.44■□□□□ 0.54
PLOD3O60568 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PLOD3O60568 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PLOD3O60568 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.44■□□□□ 0.54
PLOD3O60568 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PLOD3O60568 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.43■□□□□ 0.54
PLOD3O60568 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
PLOD3O60568 TFP1-202ENST00000475455 1573 ntBASIC18.43■□□□□ 0.54
PLOD3O60568 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.43■□□□□ 0.54
PLOD3O60568 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PLOD3O60568 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.43■□□□□ 0.54
PLOD3O60568 UNC93B4-201ENST00000505679 747 ntBASIC18.43■□□□□ 0.54
PLOD3O60568 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PLOD3O60568 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.43■□□□□ 0.54
PLOD3O60568 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.43■□□□□ 0.54
PLOD3O60568 AC087289.5-201ENST00000586076 3175 ntBASIC18.43■□□□□ 0.54
PLOD3O60568 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PLOD3O60568 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.42■□□□□ 0.54
PLOD3O60568 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.42■□□□□ 0.54
PLOD3O60568 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.42■□□□□ 0.54
PLOD3O60568 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.42■□□□□ 0.54
PLOD3O60568 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.42■□□□□ 0.54
PLOD3O60568 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PLOD3O60568 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.42■□□□□ 0.54
PLOD3O60568 AC008687.6-201ENST00000596318 630 ntBASIC18.42■□□□□ 0.54
PLOD3O60568 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PLOD3O60568 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.42■□□□□ 0.54
PLOD3O60568 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.42■□□□□ 0.54
PLOD3O60568 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PLOD3O60568 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PLOD3O60568 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.41■□□□□ 0.54
PLOD3O60568 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.41■□□□□ 0.54
PLOD3O60568 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PLOD3O60568 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PLOD3O60568 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.41■□□□□ 0.54
PLOD3O60568 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.41■□□□□ 0.54
PLOD3O60568 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.41■□□□□ 0.54
PLOD3O60568 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PLOD3O60568 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.41■□□□□ 0.54
PLOD3O60568 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.41■□□□□ 0.54
PLOD3O60568 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.41■□□□□ 0.54
PLOD3O60568 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PLOD3O60568 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.41■□□□□ 0.54
PLOD3O60568 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms