Protein–RNA interactions for Protein: O60488

ACSL4, Long-chain-fatty-acid--CoA ligase 4, humanhuman

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL4O60488 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.2■□□□□ 0.82
ACSL4O60488 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACSL4O60488 KRT17P2-201ENST00000300992 1314 ntBASIC20.2■□□□□ 0.82
ACSL4O60488 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.2■□□□□ 0.82
ACSL4O60488 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ACSL4O60488 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACSL4O60488 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.2■□□□□ 0.82
ACSL4O60488 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.2■□□□□ 0.82
ACSL4O60488 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 KRT8P8-201ENST00000434750 1448 ntBASIC20.19■□□□□ 0.82
ACSL4O60488 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.19■□□□□ 0.82
ACSL4O60488 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ACSL4O60488 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.19■□□□□ 0.82
ACSL4O60488 MIR4785-201ENST00000585005 73 ntBASIC20.19■□□□□ 0.82
ACSL4O60488 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ACSL4O60488 CR392000.1-201ENST00000624770 1228 ntBASIC20.19■□□□□ 0.82
ACSL4O60488 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACSL4O60488 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ACSL4O60488 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ACSL4O60488 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ACSL4O60488 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ACSL4O60488 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ACSL4O60488 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ACSL4O60488 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ACSL4O60488 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ACSL4O60488 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.18■□□□□ 0.82
ACSL4O60488 AC026471.5-201ENST00000615068 467 ntBASIC20.18■□□□□ 0.82
ACSL4O60488 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.18■□□□□ 0.82
ACSL4O60488 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ACSL4O60488 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.18■□□□□ 0.82
ACSL4O60488 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACSL4O60488 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ACSL4O60488 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.17■□□□□ 0.82
ACSL4O60488 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.17■□□□□ 0.82
ACSL4O60488 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.17■□□□□ 0.82
ACSL4O60488 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.17■□□□□ 0.82
ACSL4O60488 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.17■□□□□ 0.82
ACSL4O60488 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 KRT16P1-201ENST00000399124 1418 ntBASIC20.17■□□□□ 0.82
ACSL4O60488 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.17■□□□□ 0.82
ACSL4O60488 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ACSL4O60488 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACSL4O60488 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.17■□□□□ 0.82
ACSL4O60488 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
ACSL4O60488 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ACSL4O60488 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ACSL4O60488 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.16■□□□□ 0.82
ACSL4O60488 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.16■□□□□ 0.82
ACSL4O60488 AL445675.2-201ENST00000620291 557 ntBASIC20.16■□□□□ 0.82
ACSL4O60488 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
ACSL4O60488 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.16■□□□□ 0.82
ACSL4O60488 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.16■□□□□ 0.82
ACSL4O60488 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ACSL4O60488 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms