Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSNA1O43805 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSNA1O43805 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.69■□□□□ 0.26
SSNA1O43805 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SSNA1O43805 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.69■□□□□ 0.26
SSNA1O43805 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SSNA1O43805 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.69■□□□□ 0.26
SSNA1O43805 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SSNA1O43805 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.69■□□□□ 0.26
SSNA1O43805 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SSNA1O43805 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SSNA1O43805 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SSNA1O43805 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.69■□□□□ 0.26
SSNA1O43805 AL031848.2-201ENST00000607670 837 ntBASIC16.69■□□□□ 0.26
SSNA1O43805 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SSNA1O43805 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSNA1O43805 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
SSNA1O43805 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SSNA1O43805 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
SSNA1O43805 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SSNA1O43805 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.68■□□□□ 0.26
SSNA1O43805 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SSNA1O43805 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.68■□□□□ 0.26
SSNA1O43805 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 ATP5G2P3-201ENST00000429083 425 ntBASIC16.68■□□□□ 0.26
SSNA1O43805 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.68■□□□□ 0.26
SSNA1O43805 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.68■□□□□ 0.26
SSNA1O43805 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 KRT8P33-201ENST00000508125 1423 ntBASIC16.68■□□□□ 0.26
SSNA1O43805 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.68■□□□□ 0.26
SSNA1O43805 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SSNA1O43805 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.68■□□□□ 0.26
SSNA1O43805 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSNA1O43805 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.67■□□□□ 0.26
SSNA1O43805 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSNA1O43805 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSNA1O43805 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.67■□□□□ 0.26
SSNA1O43805 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SSNA1O43805 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.67■□□□□ 0.26
SSNA1O43805 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.67■□□□□ 0.26
SSNA1O43805 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.67■□□□□ 0.26
SSNA1O43805 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 AC103834.1-201ENST00000520383 144 ntBASIC16.67■□□□□ 0.26
SSNA1O43805 AP005435.1-201ENST00000529293 1178 ntBASIC16.67■□□□□ 0.26
SSNA1O43805 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SSNA1O43805 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSNA1O43805 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
SSNA1O43805 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.67■□□□□ 0.26
SSNA1O43805 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSNA1O43805 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SSNA1O43805 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms