Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.07■□□□□ 0.48
TO15178 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.07■□□□□ 0.48
TO15178 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.07■□□□□ 0.48
TO15178 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
TO15178 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TO15178 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.07■□□□□ 0.48
TO15178 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TO15178 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
TO15178 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.06■□□□□ 0.48
TO15178 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.06■□□□□ 0.48
TO15178 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.06■□□□□ 0.48
TO15178 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 AC125437.2-201ENST00000625180 2167 ntBASIC18.06■□□□□ 0.48
TO15178 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.06■□□□□ 0.48
TO15178 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.06■□□□□ 0.48
TO15178 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 AC142381.4-202ENST00000563973 229 ntBASIC18.06■□□□□ 0.48
TO15178 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.06■□□□□ 0.48
TO15178 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.06■□□□□ 0.48
TO15178 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.06■□□□□ 0.48
TO15178 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TO15178 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TO15178 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.05■□□□□ 0.48
TO15178 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TO15178 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TO15178 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.05■□□□□ 0.48
TO15178 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TO15178 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TO15178 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TO15178 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.05■□□□□ 0.48
TO15178 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.05■□□□□ 0.48
TO15178 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.05■□□□□ 0.48
TO15178 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TO15178 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TO15178 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TO15178 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TO15178 KRT8P8-201ENST00000434750 1448 ntBASIC18.05■□□□□ 0.48
TO15178 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.05■□□□□ 0.48
TO15178 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TO15178 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TO15178 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TO15178 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
TO15178 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TO15178 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TO15178 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TO15178 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.04■□□□□ 0.48
TO15178 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TO15178 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TO15178 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.04■□□□□ 0.48
TO15178 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.04■□□□□ 0.48
TO15178 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TO15178 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.04■□□□□ 0.48
TO15178 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.04■□□□□ 0.48
TO15178 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TO15178 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.04■□□□□ 0.48
TO15178 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.04■□□□□ 0.48
TO15178 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TO15178 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TO15178 TREX1-205ENST00000625293 1783 ntBASIC18.04■□□□□ 0.48
TO15178 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TO15178 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.04■□□□□ 0.48
TO15178 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.04■□□□□ 0.48
TO15178 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TO15178 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.04■□□□□ 0.48
TO15178 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TO15178 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TO15178 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TO15178 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.03■□□□□ 0.48
TO15178 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TO15178 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.03■□□□□ 0.48
TO15178 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.03■□□□□ 0.48
TO15178 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.03■□□□□ 0.48
TO15178 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.03■□□□□ 0.48
TO15178 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.03■□□□□ 0.48
TO15178 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.03■□□□□ 0.48
TO15178 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TO15178 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TO15178 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TO15178 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.03■□□□□ 0.48
TO15178 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TO15178 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.02■□□□□ 0.48
TO15178 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms