Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1AO00322 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UPK1AO00322 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
UPK1AO00322 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK1AO00322 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.58■□□□□ 0.57
UPK1AO00322 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
UPK1AO00322 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPK1AO00322 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.58■□□□□ 0.57
UPK1AO00322 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
UPK1AO00322 AC097658.1-201ENST00000475555 843 ntBASIC18.58■□□□□ 0.56
UPK1AO00322 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.58■□□□□ 0.56
UPK1AO00322 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
UPK1AO00322 AC142086.2-201ENST00000569753 217 ntBASIC18.58■□□□□ 0.56
UPK1AO00322 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.58■□□□□ 0.56
UPK1AO00322 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1AO00322 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1AO00322 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1AO00322 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.58■□□□□ 0.56
UPK1AO00322 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.58■□□□□ 0.56
UPK1AO00322 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1AO00322 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
UPK1AO00322 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPK1AO00322 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.57■□□□□ 0.56
UPK1AO00322 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.57■□□□□ 0.56
UPK1AO00322 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 AC073210.2-201ENST00000430369 194 ntBASIC18.57■□□□□ 0.56
UPK1AO00322 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.57■□□□□ 0.56
UPK1AO00322 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.57■□□□□ 0.56
UPK1AO00322 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.57■□□□□ 0.56
UPK1AO00322 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
UPK1AO00322 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.57■□□□□ 0.56
UPK1AO00322 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.57■□□□□ 0.56
UPK1AO00322 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPK1AO00322 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
UPK1AO00322 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UPK1AO00322 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UPK1AO00322 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.56■□□□□ 0.56
UPK1AO00322 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UPK1AO00322 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.56■□□□□ 0.56
UPK1AO00322 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
UPK1AO00322 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.56■□□□□ 0.56
UPK1AO00322 AC005829.2-201ENST00000571422 1056 ntBASIC18.56■□□□□ 0.56
UPK1AO00322 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.56■□□□□ 0.56
UPK1AO00322 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.56■□□□□ 0.56
UPK1AO00322 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
UPK1AO00322 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UPK1AO00322 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPK1AO00322 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.55■□□□□ 0.56
UPK1AO00322 AC009237.14-201ENST00000609975 1594 ntBASIC18.55■□□□□ 0.56
UPK1AO00322 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1AO00322 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1AO00322 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UPK1AO00322 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1AO00322 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1AO00322 HLA-L-209ENST00000420110 1011 ntBASIC18.55■□□□□ 0.56
UPK1AO00322 AC069152.1-201ENST00000438030 544 ntBASIC18.55■□□□□ 0.56
UPK1AO00322 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.55■□□□□ 0.56
UPK1AO00322 AC083880.1-201ENST00000608266 535 ntBASIC18.55■□□□□ 0.56
UPK1AO00322 AC133041.1-202ENST00000642053 222 ntBASIC18.55■□□□□ 0.56
UPK1AO00322 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1AO00322 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1AO00322 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.55■□□□□ 0.56
UPK1AO00322 AL032819.2-201ENST00000624543 2162 ntBASIC18.55■□□□□ 0.56
UPK1AO00322 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UPK1AO00322 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UPK1AO00322 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
UPK1AO00322 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.54■□□□□ 0.56
UPK1AO00322 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UPK1AO00322 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 PHGDH-210ENST00000641115 1638 ntBASIC18.54■□□□□ 0.56
UPK1AO00322 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UPK1AO00322 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms