Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.29□□□□□ -0.12
NACAE9PAV3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.29□□□□□ -0.12
NACAE9PAV3 MIR4758-201ENST00000577688 71 ntBASIC14.29□□□□□ -0.12
NACAE9PAV3 CYP2T3P-201ENST00000601990 817 ntBASIC14.29□□□□□ -0.12
NACAE9PAV3 AC100791.3-201ENST00000617619 330 ntBASIC14.29□□□□□ -0.12
NACAE9PAV3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NACAE9PAV3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.29□□□□□ -0.12
NACAE9PAV3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.29□□□□□ -0.12
NACAE9PAV3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NACAE9PAV3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NACAE9PAV3 AC087289.5-201ENST00000586076 3175 ntBASIC14.28□□□□□ -0.12
NACAE9PAV3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.28□□□□□ -0.12
NACAE9PAV3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NACAE9PAV3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.28□□□□□ -0.12
NACAE9PAV3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NACAE9PAV3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NACAE9PAV3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.28□□□□□ -0.12
NACAE9PAV3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NACAE9PAV3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.28□□□□□ -0.12
NACAE9PAV3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.28□□□□□ -0.12
NACAE9PAV3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.28□□□□□ -0.12
NACAE9PAV3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
NACAE9PAV3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.28□□□□□ -0.12
NACAE9PAV3 TMEM191A-211ENST00000637163 1067 ntBASIC14.28□□□□□ -0.12
NACAE9PAV3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NACAE9PAV3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NACAE9PAV3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NACAE9PAV3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.27□□□□□ -0.12
NACAE9PAV3 RARRES2P4-201ENST00000514074 484 ntBASIC14.27□□□□□ -0.12
NACAE9PAV3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.27□□□□□ -0.12
NACAE9PAV3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NACAE9PAV3 ITM2C-210ENST00000620962 501 ntBASIC14.27□□□□□ -0.12
NACAE9PAV3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NACAE9PAV3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
NACAE9PAV3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.27□□□□□ -0.12
NACAE9PAV3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.27□□□□□ -0.12
NACAE9PAV3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NACAE9PAV3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NACAE9PAV3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NACAE9PAV3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NACAE9PAV3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
NACAE9PAV3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NACAE9PAV3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NACAE9PAV3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NACAE9PAV3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NACAE9PAV3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NACAE9PAV3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.27□□□□□ -0.13
NACAE9PAV3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NACAE9PAV3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
NACAE9PAV3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
NACAE9PAV3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.27□□□□□ -0.13
NACAE9PAV3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.27□□□□□ -0.13
NACAE9PAV3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NACAE9PAV3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NACAE9PAV3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NACAE9PAV3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NACAE9PAV3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NACAE9PAV3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NACAE9PAV3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.26□□□□□ -0.13
NACAE9PAV3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NACAE9PAV3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.26□□□□□ -0.13
NACAE9PAV3 AC093827.2-201ENST00000512654 315 ntBASIC14.26□□□□□ -0.13
NACAE9PAV3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.26□□□□□ -0.13
NACAE9PAV3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NACAE9PAV3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NACAE9PAV3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.26□□□□□ -0.13
NACAE9PAV3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NACAE9PAV3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NACAE9PAV3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NACAE9PAV3 KRT17P1-201ENST00000399211 1546 ntBASIC14.26□□□□□ -0.13
NACAE9PAV3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NACAE9PAV3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NACAE9PAV3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms