Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF223E7ERA6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 COX11P1-201ENST00000489116 835 ntBASIC16.28■□□□□ 0.2
RNF223E7ERA6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 AL121894.2-201ENST00000602977 491 ntBASIC16.28■□□□□ 0.2
RNF223E7ERA6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF223E7ERA6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF223E7ERA6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 SLC25A1P2-201ENST00000430693 912 ntBASIC16.27■□□□□ 0.2
RNF223E7ERA6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 AC092473.1-201ENST00000441098 221 ntBASIC16.27■□□□□ 0.2
RNF223E7ERA6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 HLA-A-209ENST00000638375 975 ntBASIC16.27■□□□□ 0.2
RNF223E7ERA6 AP000550.4-202ENST00000639755 178 ntBASIC16.27■□□□□ 0.2
RNF223E7ERA6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF223E7ERA6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF223E7ERA6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RNF223E7ERA6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF223E7ERA6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF223E7ERA6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RNF223E7ERA6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF223E7ERA6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF223E7ERA6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF223E7ERA6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF223E7ERA6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF223E7ERA6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF223E7ERA6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF223E7ERA6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF223E7ERA6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF223E7ERA6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF223E7ERA6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF223E7ERA6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF223E7ERA6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF223E7ERA6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms