Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.99□□□□□ -0.17
LYRM9A8MSI8 AL135905.2-201ENST00000584934 1404 ntBASIC13.98□□□□□ -0.17
LYRM9A8MSI8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 AL353807.1-201ENST00000427475 662 ntBASIC13.98□□□□□ -0.17
LYRM9A8MSI8 AL158047.1-201ENST00000445918 881 ntBASIC13.98□□□□□ -0.17
LYRM9A8MSI8 AC098590.1-201ENST00000468126 897 ntBASIC13.98□□□□□ -0.17
LYRM9A8MSI8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYRM9A8MSI8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.97□□□□□ -0.17
LYRM9A8MSI8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 AP006294.2-201ENST00000641667 209 ntBASIC13.97□□□□□ -0.17
LYRM9A8MSI8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYRM9A8MSI8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms