Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC26.68■■□□□ 1.86
SBNO1A3KN83 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
SBNO1A3KN83 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
SBNO1A3KN83 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SBNO1A3KN83 HCG4P8-203ENST00000443049 980 ntBASIC26.68■■□□□ 1.86
SBNO1A3KN83 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC26.68■■□□□ 1.86
SBNO1A3KN83 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC26.68■■□□□ 1.86
SBNO1A3KN83 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SBNO1A3KN83 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SBNO1A3KN83 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SBNO1A3KN83 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
SBNO1A3KN83 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
SBNO1A3KN83 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC26.67■■□□□ 1.86
SBNO1A3KN83 KRT18P38-201ENST00000449496 1282 ntBASIC26.67■■□□□ 1.86
SBNO1A3KN83 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC26.67■■□□□ 1.86
SBNO1A3KN83 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC26.67■■□□□ 1.86
SBNO1A3KN83 CD81-212ENST00000526072 1172 ntTSL 5 BASIC26.67■■□□□ 1.86
SBNO1A3KN83 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC26.67■■□□□ 1.86
SBNO1A3KN83 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC26.67■■□□□ 1.86
SBNO1A3KN83 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SBNO1A3KN83 AL023973.1-201ENST00000624619 620 ntBASIC26.67■■□□□ 1.86
SBNO1A3KN83 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC26.67■■□□□ 1.86
SBNO1A3KN83 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
SBNO1A3KN83 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SBNO1A3KN83 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SBNO1A3KN83 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
SBNO1A3KN83 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.66■■□□□ 1.86
SBNO1A3KN83 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SBNO1A3KN83 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
SBNO1A3KN83 DERL1-203ENST00000419562 918 ntTSL 2 BASIC26.66■■□□□ 1.86
SBNO1A3KN83 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC26.66■■□□□ 1.86
SBNO1A3KN83 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SBNO1A3KN83 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC26.66■■□□□ 1.86
SBNO1A3KN83 AC069148.1-201ENST00000608741 768 ntBASIC26.66■■□□□ 1.86
SBNO1A3KN83 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
SBNO1A3KN83 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC26.66■■□□□ 1.86
SBNO1A3KN83 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SBNO1A3KN83 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC26.65■■□□□ 1.86
SBNO1A3KN83 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SBNO1A3KN83 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC26.65■■□□□ 1.86
SBNO1A3KN83 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.65■■□□□ 1.86
SBNO1A3KN83 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SBNO1A3KN83 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SBNO1A3KN83 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SBNO1A3KN83 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SBNO1A3KN83 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SBNO1A3KN83 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SBNO1A3KN83 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SBNO1A3KN83 PTK2-216ENST00000519881 863 ntTSL 3 BASIC26.65■■□□□ 1.86
SBNO1A3KN83 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC26.65■■□□□ 1.86
SBNO1A3KN83 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SBNO1A3KN83 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
SBNO1A3KN83 PRSS44-201ENST00000515154 1146 ntBASIC26.64■■□□□ 1.86
SBNO1A3KN83 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
SBNO1A3KN83 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC26.64■■□□□ 1.86
SBNO1A3KN83 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC26.64■■□□□ 1.86
SBNO1A3KN83 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SBNO1A3KN83 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.64■■□□□ 1.85
SBNO1A3KN83 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.64■■□□□ 1.85
SBNO1A3KN83 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
SBNO1A3KN83 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SBNO1A3KN83 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SBNO1A3KN83 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SBNO1A3KN83 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SBNO1A3KN83 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SBNO1A3KN83 ETFA-216ENST00000560726 942 ntTSL 3 BASIC26.63■■□□□ 1.85
SBNO1A3KN83 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
SBNO1A3KN83 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC26.63■■□□□ 1.85
SBNO1A3KN83 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.63■■□□□ 1.85
SBNO1A3KN83 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
SBNO1A3KN83 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC26.62■■□□□ 1.85
SBNO1A3KN83 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC26.62■■□□□ 1.85
SBNO1A3KN83 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
SBNO1A3KN83 AL136038.3-201ENST00000561909 1096 ntBASIC26.62■■□□□ 1.85
SBNO1A3KN83 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC26.62■■□□□ 1.85
SBNO1A3KN83 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC26.62■■□□□ 1.85
SBNO1A3KN83 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SBNO1A3KN83 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SBNO1A3KN83 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SBNO1A3KN83 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.62■■□□□ 1.85
SBNO1A3KN83 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SBNO1A3KN83 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 TMEM179-206ENST00000616017 1645 ntBASIC26.61■■□□□ 1.85
SBNO1A3KN83 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC26.61■■□□□ 1.85
SBNO1A3KN83 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC26.61■■□□□ 1.85
SBNO1A3KN83 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC26.61■■□□□ 1.85
SBNO1A3KN83 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC26.61■■□□□ 1.85
SBNO1A3KN83 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC26.61■■□□□ 1.85
SBNO1A3KN83 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
SBNO1A3KN83 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
SBNO1A3KN83 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms