Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 CDV3P1-201ENST00000471403 739 ntBASIC17.7■□□□□ 0.42
TMEM129A0AVI4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM129A0AVI4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 PGM5P4-201ENST00000421970 445 ntBASIC17.69■□□□□ 0.42
TMEM129A0AVI4 AC069152.1-201ENST00000438030 544 ntBASIC17.69■□□□□ 0.42
TMEM129A0AVI4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 AC133041.1-202ENST00000642053 222 ntBASIC17.69■□□□□ 0.42
TMEM129A0AVI4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM129A0AVI4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 BX276092.2-201ENST00000417668 665 ntBASIC17.68■□□□□ 0.42
TMEM129A0AVI4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 MIR4758-201ENST00000577688 71 ntBASIC17.68■□□□□ 0.42
TMEM129A0AVI4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM129A0AVI4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM129A0AVI4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
TMEM129A0AVI4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.67■□□□□ 0.42
TMEM129A0AVI4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms