Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AL691432.2-201ENST00000607222 2038 ntBASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 MIR718-201ENST00000390190 70 ntBASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC008550.1-201ENST00000511500 884 ntBASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC120498.8-201ENST00000614275 531 ntBASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV4S1A1TA0A5B7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 BX323043.1-201ENST00000641006 1765 ntBASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV4S1A1TA0A5B7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC018445.3-201ENST00000624177 1945 ntBASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms