Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 AC005829.2-201ENST00000571422 1056 ntBASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 AC006557.6-201ENST00000623071 864 ntBASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TCRBV7S3A2A0A539 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 GUSBP6-202ENST00000438529 1198 ntBASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TCRBV7S3A2A0A539 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 MIR935-201ENST00000401179 91 ntBASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV7S3A2A0A539 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
TCRBV7S3A2A0A539 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 AL121832.2-201ENST00000610979 668 ntBASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TCRBV7S3A2A0A539 AL049812.1-201ENST00000432563 2267 ntBASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 AC073210.2-201ENST00000430369 194 ntBASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms