Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC25.04■■□□□ 1.6
LOC102724428A0A0B4J2F2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LOC102724428A0A0B4J2F2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LOC102724428A0A0B4J2F2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LOC102724428A0A0B4J2F2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 KRT18P38-201ENST00000449496 1282 ntBASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 AC140113.3-201ENST00000605663 199 ntBASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 AC008622.2-201ENST00000617006 1229 ntBASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 SMG8-203ENST00000578922 2178 ntBASIC25.03■■□□□ 1.6
LOC102724428A0A0B4J2F2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 PRSS44-201ENST00000515154 1146 ntBASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 AL160286.2-201ENST00000567150 934 ntBASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LOC102724428A0A0B4J2F2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC102724428A0A0B4J2F2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 AP003041.3-201ENST00000527151 707 ntBASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LOC102724428A0A0B4J2F2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 AL450487.1-201ENST00000426799 995 ntBASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LOC102724428A0A0B4J2F2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms