Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 TFP1-202ENST00000475455 1573 ntBASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV2A0A0B4J234 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 KRT17P3-201ENST00000420566 1262 ntBASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV2A0A0B4J234 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 PRKY-204ENST00000533551 1019 ntBASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV2A0A0B4J234 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms