Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV9-1A0A075B6T8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV9-1A0A075B6T8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV9-1A0A075B6T8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV9-1A0A075B6T8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV9-1A0A075B6T8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV9-1A0A075B6T8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 MIR4449-201ENST00000578365 66 ntBASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 AC053503.5-201ENST00000601508 636 ntBASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 AC099791.2-201ENST00000605725 427 ntBASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV9-1A0A075B6T8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV9-1A0A075B6T8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV9-1A0A075B6T8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.71□□□□□ -0.06
TRAV9-1A0A075B6T8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV9-1A0A075B6T8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV9-1A0A075B6T8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 AC245052.3-201ENST00000450182 901 ntBASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 AC103724.3-201ENST00000564481 992 ntBASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 RARRES2P11-201ENST00000635158 484 ntBASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV9-1A0A075B6T8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 AC067852.2-201ENST00000590513 2313 ntBASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV9-1A0A075B6T8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms