Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 AP001273.1-201ENST00000624493 3152 ntBASIC4.02□□□□□ -1.77
HLA-DQA1P01909 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQA1P01909 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC008627.1-201ENST00000517511 1704 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 SAMMSON-213ENST00000641336 1521 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RNU1-65P-201ENST00000363919 148 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RN7SKP16-201ENST00000410180 299 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RN7SKP108-201ENST00000411367 328 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AL357752.1-201ENST00000412817 349 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RPS6P23-201ENST00000413224 722 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RPL35AP3-201ENST00000414680 288 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 MTND4LP21-201ENST00000415303 295 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AKR1B10P1-201ENST00000425765 942 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC113412.1-201ENST00000425840 504 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC023141.3-201ENST00000436698 278 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC068228.1-201ENST00000461723 211 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC073610.1-201ENST00000489971 396 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AL158068.1-201ENST00000506116 616 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 DUTP7-201ENST00000507982 486 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC018797.1-201ENST00000510791 255 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC139365.2-201ENST00000517972 253 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 OR10D4P-201ENST00000525892 951 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RN7SL52P-201ENST00000584271 284 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 SNORA35B-201ENST00000607417 129 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC096586.2-201ENST00000610260 441 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RN7SL787P-201ENST00000613000 284 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RN7SL544P-201ENST00000617232 284 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 RN7SL763P-201ENST00000620922 284 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC111152.1-202ENST00000635848 339 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 AC093225.1-201ENST00000506867 1408 ntBASIC4.01□□□□□ -1.77
HLA-DQA1P01909 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQA1P01909 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
HLA-DQA1P01909 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 DDX18P4-201ENST00000511690 1966 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DQA1P01909 HSPD1P9-201ENST00000420325 1636 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 SCARNA15-201ENST00000607520 4325 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DQA1P01909 RNA5SP198-201ENST00000410376 127 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQA1P01909 AC007161.1-204ENST00000423039 460 ntBASIC4□□□□□ -1.77
HLA-DQA1P01909 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DQA1P01909 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms