Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.78□□□□□ -1.64
CDX1P47902 AC245014.3-201ENST00000618589 347 ntBASIC4.78□□□□□ -1.64
CDX1P47902 MIR6861-201ENST00000618657 64 ntBASIC4.78□□□□□ -1.64
CDX1P47902 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.78□□□□□ -1.64
CDX1P47902 AL512652.1-201ENST00000619006 500 ntBASIC4.78□□□□□ -1.64
CDX1P47902 AC022400.9-201ENST00000623633 273 ntBASIC4.78□□□□□ -1.64
CDX1P47902 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
CDX1P47902 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDX1P47902 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDX1P47902 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.78□□□□□ -1.64
CDX1P47902 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDX1P47902 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDX1P47902 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDX1P47902 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
CDX1P47902 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
CDX1P47902 THAP12P5-201ENST00000405864 2275 ntBASIC4.77□□□□□ -1.65
CDX1P47902 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.77□□□□□ -1.65
CDX1P47902 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 AC020656.2-201ENST00000613291 5309 ntBASIC4.77□□□□□ -1.65
CDX1P47902 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 AC083899.1-201ENST00000454465 3819 ntBASIC4.77□□□□□ -1.65
CDX1P47902 FBXL21-201ENST00000297158 1305 ntBASIC4.77□□□□□ -1.65
CDX1P47902 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 RNA5SP110-201ENST00000362638 115 ntBASIC4.77□□□□□ -1.65
CDX1P47902 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 RN7SKP240-201ENST00000410583 375 ntBASIC4.77□□□□□ -1.65
CDX1P47902 GPS2P1-201ENST00000411761 986 ntBASIC4.77□□□□□ -1.65
CDX1P47902 NPM1P40-201ENST00000412758 733 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC245096.1-201ENST00000413104 546 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.77□□□□□ -1.65
CDX1P47902 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.77□□□□□ -1.65
CDX1P47902 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 RPL12P12-201ENST00000424633 501 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC073508.1-201ENST00000428866 656 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 AP000936.3-201ENST00000438127 255 ntBASIC4.77□□□□□ -1.65
CDX1P47902 ATP5LP2-201ENST00000440646 311 ntBASIC4.77□□□□□ -1.65
CDX1P47902 HMGN1P2-201ENST00000445197 310 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.77□□□□□ -1.65
CDX1P47902 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 AC022431.1-201ENST00000450941 438 ntBASIC4.77□□□□□ -1.65
CDX1P47902 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 SYT14P1-201ENST00000481459 721 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.77□□□□□ -1.65
CDX1P47902 AC138866.2-201ENST00000508650 584 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 IGKV3D-25-201ENST00000519599 235 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 AC027369.2-201ENST00000528030 440 ntBASIC4.77□□□□□ -1.65
CDX1P47902 OR6M2P-201ENST00000529831 871 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC068305.2-201ENST00000550567 1205 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 AC007956.1-201ENST00000555623 542 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AL049870.4-201ENST00000555741 486 ntBASIC4.77□□□□□ -1.65
CDX1P47902 SETP1-201ENST00000556014 845 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AL390334.1-201ENST00000556395 450 ntBASIC4.77□□□□□ -1.65
CDX1P47902 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.77□□□□□ -1.65
CDX1P47902 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 MIR3936-201ENST00000584304 110 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.77□□□□□ -1.65
CDX1P47902 AC090236.2-201ENST00000587933 1101 ntBASIC4.77□□□□□ -1.65
CDX1P47902 NPIPB1P-202ENST00000588786 828 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.77□□□□□ -1.65
CDX1P47902 AL049844.2-201ENST00000604280 628 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC008555.7-201ENST00000605008 583 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC073137.1-201ENST00000605636 634 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC022106.1-201ENST00000612834 766 ntBASIC4.77□□□□□ -1.65
CDX1P47902 RN7SL261P-201ENST00000613441 282 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AL139407.1-201ENST00000613826 1175 ntBASIC4.77□□□□□ -1.65
CDX1P47902 AC015712.7-201ENST00000615211 635 ntBASIC4.77□□□□□ -1.65
CDX1P47902 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.77□□□□□ -1.65
CDX1P47902 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDX1P47902 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CDX1P47902 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 CFTRP2-201ENST00000634304 199 ntBASIC4.77□□□□□ -1.65
CDX1P47902 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CDX1P47902 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms