RNA–Protein interactions for RNA: ENST00000395495.5

A1CF-207, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5 BASIC

Gene A1CF, Length 9,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-207ENST00000395495 DCAF8L2P0C7V8 631 aa9.12□□□□□ -0.95
A1CF-207ENST00000395495 AEBP2Q6ZN18 517 aaPredicted RBP8.82□□□□□ -1
A1CF-207ENST00000395495 TRIM41Q8WV44 630 aa8.69□□□□□ -1.02
A1CF-207ENST00000395495 PELP1Q8IZL8 1130 aaKnown RBP8.58□□□□□ -1.04
A1CF-207ENST00000395495 FAM9AQ8IZU1 332 aaPredicted RBP8.47□□□□□ -1.05
A1CF-207ENST00000395495 ABCC9O60706 1549 aa8.35□□□□□ -1.07
A1CF-207ENST00000395495 TRHP20396 242 aaPredicted RBP8.34□□□□□ -1.07
A1CF-207ENST00000395495 PABPN1Q86U42 306 aaKnown RBP eCLIP8.28□□□□□ -1.08
A1CF-207ENST00000395495 APLP2Q06481 763 aa8.21□□□□□ -1.09
A1CF-207ENST00000395495 CCER1Q8TC90 406 aaPredicted RBP8.19□□□□□ -1.1
A1CF-207ENST00000395495 NISCHQ9Y2I1 1504 aa8.17□□□□□ -1.1
A1CF-207ENST00000395495 ERICH6Q7L0X2 663 aa8.14□□□□□ -1.11
A1CF-207ENST00000395495 DNAJC5Q9H3Z4 198 aa8.11□□□□□ -1.11
A1CF-207ENST00000395495 DNAJC5BQ9UF47 199 aa8.02□□□□□ -1.12
A1CF-207ENST00000395495 SUPT5HO00267 1087 aaKnown RBP7.92□□□□□ -1.14
A1CF-207ENST00000395495 FBLN2P98095 1184 aa7.86□□□□□ -1.15
A1CF-207ENST00000395495 EHMT2Q96KQ7 1210 aa7.85□□□□□ -1.15
A1CF-207ENST00000395495 YTHDC1Q96MU7 727 aaKnown RBP7.84□□□□□ -1.15
A1CF-207ENST00000395495 NEFLP07196 543 aa7.84□□□□□ -1.15
A1CF-207ENST00000395495 DAXXQ9UER7 740 aaPredicted RBP7.84□□□□□ -1.15
A1CF-207ENST00000395495 PLPPR3Q6T4P5 718 aa7.79□□□□□ -1.16
A1CF-207ENST00000395495 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
A1CF-207ENST00000395495 ATP1B4Q9UN42 357 aaPredicted RBP7.78□□□□□ -1.16
A1CF-207ENST00000395495 CENPBP07199 599 aaPredicted RBP7.78□□□□□ -1.16
A1CF-207ENST00000395495 NPM1P06748 294 aaKnown RBP eCLIP7.74□□□□□ -1.17
A1CF-207ENST00000395495 TTBK1Q5TCY1 1321 aaPredicted RBP7.74□□□□□ -1.17
A1CF-207ENST00000395495 CYB5RLQ6IPT4 315 aa7.68□□□□□ -1.18
A1CF-207ENST00000395495 ERCC6Q03468 1493 aa7.64□□□□□ -1.19
A1CF-207ENST00000395495 MYT1Q01538 1121 aa7.64□□□□□ -1.19
A1CF-207ENST00000395495 RANGAP1P46060 587 aaPredicted RBP7.63□□□□□ -1.19
A1CF-207ENST00000395495 PHF23Q9BUL5 403 aaPredicted RBP7.62□□□□□ -1.19
A1CF-207ENST00000395495 OSCARQ8IYS5 282 aa7.61□□□□□ -1.19
A1CF-207ENST00000395495 SCAF1Q9H7N4 1312 aaKnown RBP7.6□□□□□ -1.19
A1CF-207ENST00000395495 ZEB1P37275 1124 aaPredicted RBP7.59□□□□□ -1.19
A1CF-207ENST00000395495 SLC4A1APQ9BWU0 796 aaKnown RBP7.58□□□□□ -1.2
A1CF-207ENST00000395495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.56□□□□□ -1.2
A1CF-207ENST00000395495 HNRNPUL2Q1KMD3 747 aaKnown RBP7.56□□□□□ -1.2
A1CF-207ENST00000395495 ZNF316A6NFI3 1004 aaPredicted RBP7.56□□□□□ -1.2
A1CF-207ENST00000395495 PCGF6Q9BYE7 350 aa7.56□□□□□ -1.2
A1CF-207ENST00000395495 ZBTB47Q9UFB7 747 aaPredicted RBP7.56□□□□□ -1.2
A1CF-207ENST00000395495 SHROOM4Q9ULL8 1493 aa7.55□□□□□ -1.2
A1CF-207ENST00000395495 CLSPNQ9HAW4 1339 aa7.54□□□□□ -1.2
A1CF-207ENST00000395495 ILDR1Q86SU0 546 aaPredicted RBP7.54□□□□□ -1.2
A1CF-207ENST00000395495 SENP3Q9H4L4 574 aaPredicted RBP7.54□□□□□ -1.2
A1CF-207ENST00000395495 POLR3GLQ9BT43 218 aa7.53□□□□□ -1.2
A1CF-207ENST00000395495 CHIC1Q5VXU3 224 aa7.52□□□□□ -1.21
A1CF-207ENST00000395495 UBTFP17480 764 aaKnown RBP7.51□□□□□ -1.21
A1CF-207ENST00000395495 NEFMP07197 916 aa7.48□□□□□ -1.21
A1CF-207ENST00000395495 RTL5Q5HYW3 569 aaPredicted RBP7.48□□□□□ -1.21
A1CF-207ENST00000395495 CECR2Q9BXF3 1484 aa7.44□□□□□ -1.22
A1CF-207ENST00000395495 DCAF8L1A6NGE4 600 aa7.44□□□□□ -1.22
A1CF-207ENST00000395495 CHMP7Q8WUX9 453 aaPredicted RBP7.43□□□□□ -1.22
A1CF-207ENST00000395495 ESF1Q9H501 851 aaKnown RBP7.41□□□□□ -1.22
A1CF-207ENST00000395495 ARID4BQ4LE39 1312 aaPredicted RBP7.41□□□□□ -1.22
A1CF-207ENST00000395495 SLC24A1O60721 1099 aa7.41□□□□□ -1.22
A1CF-207ENST00000395495 DISP3Q9P2K9 1392 aa7.39□□□□□ -1.23
A1CF-207ENST00000395495 CDK11BP21127 795 aaKnown RBP7.39□□□□□ -1.23
A1CF-207ENST00000395495 CDK11AQ9UQ88 783 aaPredicted RBP7.39□□□□□ -1.23
A1CF-207ENST00000395495 FOXD1Q16676 465 aa7.38□□□□□ -1.23
A1CF-207ENST00000395495 BCANQ96GW7 911 aa7.36□□□□□ -1.23
A1CF-207ENST00000395495 CNGB1Q14028 1251 aaPredicted RBP7.31□□□□□ -1.24
A1CF-207ENST00000395495 CANXP27824 592 aaKnown RBP7.29□□□□□ -1.24
A1CF-207ENST00000395495 ITGAEP38570 1179 aa7.27□□□□□ -1.25
A1CF-207ENST00000395495 ANP32BQ92688 251 aaKnown RBP7.27□□□□□ -1.25
A1CF-207ENST00000395495 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
A1CF-207ENST00000395495 FBXO41Q8TF61 875 aa7.21□□□□□ -1.25
A1CF-207ENST00000395495 BCL11AQ9H165 835 aa7.2□□□□□ -1.26
A1CF-207ENST00000395495 FAM69CQ0P6D2 419 aa7.2□□□□□ -1.26
A1CF-207ENST00000395495 TRIM52Q96A61 297 aa7.18□□□□□ -1.26
A1CF-207ENST00000395495 STAG3Q9UJ98 1225 aa7.16□□□□□ -1.26
A1CF-207ENST00000395495 HSP90AA1P07900 732 aaKnown RBP7.16□□□□□ -1.26
A1CF-207ENST00000395495 MLECQ14165 292 aa7.16□□□□□ -1.26
A1CF-207ENST00000395495 MEX3CQ5U5Q3 659 aaKnown RBP7.14□□□□□ -1.27
A1CF-207ENST00000395495 A0A0G2JS52 829 aa7.13□□□□□ -1.27
A1CF-207ENST00000395495 PIP4K2BP78356 416 aa7.13□□□□□ -1.27
A1CF-207ENST00000395495 LMTK3Q96Q04 1460 aa7.12□□□□□ -1.27
A1CF-207ENST00000395495 RB1CC1Q8TDY2 1594 aa7.11□□□□□ -1.27
A1CF-207ENST00000395495 SOCS7O14512 581 aa7.11□□□□□ -1.27
A1CF-207ENST00000395495 ZNF326Q5BKZ1 582 aaKnown RBP7.11□□□□□ -1.27
A1CF-207ENST00000395495 UPF2Q9HAU5 1272 aaKnown RBP7.11□□□□□ -1.27
A1CF-207ENST00000395495 FAM50AQ14320 339 aaKnown RBP7.09□□□□□ -1.27
A1CF-207ENST00000395495 GLIPR1L2Q4G1C9 344 aa7.09□□□□□ -1.27
A1CF-207ENST00000395495 KCNH8Q96L42 1107 aa7.08□□□□□ -1.28
A1CF-207ENST00000395495 ANP32AP39687 249 aaKnown RBP7.06□□□□□ -1.28
A1CF-207ENST00000395495 ANP32CO43423 234 aa7.05□□□□□ -1.28
A1CF-207ENST00000395495 HAP1P54257 671 aaPredicted RBP7.04□□□□□ -1.28
A1CF-207ENST00000395495 SF3B2Q13435 895 aaKnown RBP7.04□□□□□ -1.28
A1CF-207ENST00000395495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.04□□□□□ -1.282e-6■■□□□ 12.7
A1CF-207ENST00000395495 UBAP1LF5GYI3 381 aa7.02□□□□□ -1.29
A1CF-207ENST00000395495 ZRSR1Q15695 479 aaKnown RBP7.02□□□□□ -1.29
A1CF-207ENST00000395495 DMRT2Q9Y5R5 561 aa7.02□□□□□ -1.29
A1CF-207ENST00000395495 MYH16Q9H6N6 1097 aa7.02□□□□□ -1.29
A1CF-207ENST00000395495 PDS5BQ9NTI5 1447 aa7.02□□□□□ -1.29
A1CF-207ENST00000395495 PPARGC1BQ86YN6 1023 aaKnown RBP7.01□□□□□ -1.29
A1CF-207ENST00000395495 TRIM26Q12899 539 aaPredicted RBP7.01□□□□□ -1.29
A1CF-207ENST00000395495 KRI1Q8N9T8 703 aaKnown RBP7.01□□□□□ -1.29
A1CF-207ENST00000395495 NPHP1O15259 732 aa7.01□□□□□ -1.29
A1CF-207ENST00000395495 NUTM2BA6NNL0 878 aaPredicted RBP7□□□□□ -1.29
A1CF-207ENST00000395495 NUTM2EB1AL46 878 aaPredicted RBP7□□□□□ -1.29
A1CF-207ENST00000395495 NUTM2DQ5VT03 806 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms