Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 SNORA32.2-201ENST00000384049 122 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 MIR575-201ENST00000385013 94 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 SNRPFP1-201ENST00000414761 252 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC234064.1-201ENST00000436312 247 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 EIF4A2P4-201ENST00000458691 1196 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 RN7SL182P-201ENST00000496499 300 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 SUMO2P7-201ENST00000511179 285 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 IGKV2-29-201ENST00000521304 372 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 MIR4742-201ENST00000581069 85 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 DYNLL1P1-201ENST00000595442 269 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 HNRNPA1P67-201ENST00000604027 926 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 DISC2.1-201ENST00000612827 205 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC093913.1-201ENST00000614178 329 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 GDI2P1-201ENST00000429312 1336 ntBASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
TRIM35Q9UPQ4 AC032011.1-201ENST00000611703 1549 ntBASIC9.77□□□□□ -0.84
TRIM35Q9UPQ4 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC9.77□□□□□ -0.84
TRIM35Q9UPQ4 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 NLRP9P1-201ENST00000540920 2655 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 MIR301B-201ENST00000390813 78 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AL355862.1-201ENST00000412705 353 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 GAPDHP55-201ENST00000423136 803 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 GAPDHP73-201ENST00000423411 1007 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 GAPDHP51-201ENST00000426454 1000 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AL731892.1-201ENST00000437364 1192 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AL451074.4-201ENST00000447545 470 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 RNU7-152P-201ENST00000458982 64 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 RPL23AP37-201ENST00000479658 549 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 CYP4F27P-201ENST00000514557 494 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 BTF3P12-201ENST00000519620 469 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 NRBF2P4-201ENST00000520874 850 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AC068631.3-201ENST00000538831 225 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 RN7SL835P-201ENST00000579920 262 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 FAM27E3-202ENST00000614611 340 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AC090510.2-201ENST00000617465 629 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AC099667.1-201ENST00000624222 469 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 PISRT1-201ENST00000626175 531 ntBASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM35Q9UPQ4 MAPK10-354ENST00000641823 2732 ntBASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms