Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.32□□□□□ -1.08
RNF40O75150 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.32□□□□□ -1.08
RNF40O75150 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
RNF40O75150 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.32□□□□□ -1.08
RNF40O75150 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 AL445250.1-203ENST00000641829 1535 ntBASIC8.32□□□□□ -1.08
RNF40O75150 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RNF40O75150 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RNF40O75150 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.32□□□□□ -1.08
RNF40O75150 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.32□□□□□ -1.08
RNF40O75150 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.32□□□□□ -1.08
RNF40O75150 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RNF40O75150 AC024560.2-201ENST00000507981 1497 ntBASIC8.32□□□□□ -1.08
RNF40O75150 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RNF40O75150 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC8.31□□□□□ -1.08
RNF40O75150 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.31□□□□□ -1.08
RNF40O75150 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF40O75150 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF40O75150 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
RNF40O75150 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
RNF40O75150 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RNF40O75150 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RNF40O75150 U3.1-201ENST00000362500 215 ntBASIC8.31□□□□□ -1.08
RNF40O75150 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.31□□□□□ -1.08
RNF40O75150 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.31□□□□□ -1.08
RNF40O75150 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 AL139128.1-201ENST00000413921 941 ntBASIC8.31□□□□□ -1.08
RNF40O75150 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF40O75150 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF40O75150 FO393419.3-201ENST00000428741 282 ntBASIC8.31□□□□□ -1.08
RNF40O75150 RPL35P8-201ENST00000433284 337 ntBASIC8.31□□□□□ -1.08
RNF40O75150 RPL37P21-201ENST00000435890 276 ntBASIC8.31□□□□□ -1.08
RNF40O75150 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC8.31□□□□□ -1.08
RNF40O75150 AC019185.3-201ENST00000438805 323 ntBASIC8.31□□□□□ -1.08
RNF40O75150 RPS26P30-201ENST00000443431 335 ntBASIC8.31□□□□□ -1.08
RNF40O75150 RPL7P12-201ENST00000446719 750 ntBASIC8.31□□□□□ -1.08
RNF40O75150 CECR9-201ENST00000453421 199 ntBASIC8.31□□□□□ -1.08
RNF40O75150 AC135721.2-201ENST00000464237 300 ntBASIC8.31□□□□□ -1.08
RNF40O75150 PA2G4P4-201ENST00000473864 1182 ntBASIC8.31□□□□□ -1.08
RNF40O75150 RN7SL89P-201ENST00000480252 283 ntBASIC8.31□□□□□ -1.08
RNF40O75150 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 SSX8-201ENST00000506270 579 ntBASIC8.31□□□□□ -1.08
RNF40O75150 AC107385.1-201ENST00000507985 778 ntBASIC8.31□□□□□ -1.08
RNF40O75150 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC8.31□□□□□ -1.08
RNF40O75150 AC097460.2-201ENST00000511857 741 ntBASIC8.31□□□□□ -1.08
RNF40O75150 Y_RNA.720-201ENST00000517166 92 ntBASIC8.31□□□□□ -1.08
RNF40O75150 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.31□□□□□ -1.08
RNF40O75150 SERPINA15P-201ENST00000529287 266 ntBASIC8.31□□□□□ -1.08
RNF40O75150 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF40O75150 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.31□□□□□ -1.08
RNF40O75150 AC055876.1-202ENST00000567053 138 ntBASIC8.31□□□□□ -1.08
RNF40O75150 RN7SL786P-201ENST00000579130 298 ntBASIC8.31□□□□□ -1.08
RNF40O75150 AC024023.1-201ENST00000624530 922 ntBASIC8.31□□□□□ -1.08
RNF40O75150 CLUHP10-201ENST00000631979 980 ntBASIC8.31□□□□□ -1.08
RNF40O75150 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF40O75150 AC138649.5-201ENST00000637456 137 ntBASIC8.31□□□□□ -1.08
RNF40O75150 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
RNF40O75150 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 AL139805.2-201ENST00000455305 2433 ntBASIC8.31□□□□□ -1.08
RNF40O75150 MTND5P33-201ENST00000571250 1450 ntBASIC8.31□□□□□ -1.08
RNF40O75150 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.31□□□□□ -1.08
RNF40O75150 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.31□□□□□ -1.08
RNF40O75150 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF40O75150 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
RNF40O75150 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF40O75150 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF40O75150 GDI2P1-201ENST00000429312 1336 ntBASIC8.3□□□□□ -1.08
RNF40O75150 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF40O75150 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RNF40O75150 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF40O75150 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF40O75150 ASNSP6-201ENST00000592770 1618 ntBASIC8.3□□□□□ -1.08
RNF40O75150 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF40O75150 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC8.3□□□□□ -1.08
RNF40O75150 Y_RNA.184-201ENST00000363884 108 ntBASIC8.3□□□□□ -1.08
RNF40O75150 FANK1-201ENST00000368689 522 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms