Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 MIR4660-201ENST00000583549 74 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 MIR6809-201ENST00000612189 116 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 SAMMSON-209ENST00000641222 1100 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AC019072.1-201ENST00000604535 1551 ntBASIC5.45□□□□□ -1.54
VPS33AQ96AX1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS33AQ96AX1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AL121886.1-201ENST00000358609 435 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 MIR130B-202ENST00000385018 82 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC016739.1-201ENST00000405359 345 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 RN7SKP29-201ENST00000410957 272 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC022022.1-201ENST00000430304 178 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 SCAND3P1-201ENST00000439854 1060 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AL359265.1-201ENST00000440296 795 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 BTBD7P2-201ENST00000441962 620 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AL353898.1-201ENST00000444055 238 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 GEMIN2P1-201ENST00000454246 752 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC099521.1-201ENST00000482557 334 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 RN7SL362P-201ENST00000494228 267 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC112484.3-201ENST00000505910 329 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 RN7SKP35-201ENST00000517210 151 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC139365.2-201ENST00000517972 253 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 IGKV3D-25-201ENST00000519599 235 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 OR1E3-201ENST00000575608 948 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 uc_338.31-201ENST00000615595 186 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 OR5AC4P-202ENST00000642086 985 ntBASIC5.44□□□□□ -1.54
VPS33AQ96AX1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS33AQ96AX1 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 HSPA8P17-201ENST00000427029 1382 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 AL022322.2-201ENST00000624072 20397 ntBASIC5.43□□□□□ -1.54
VPS33AQ96AX1 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS33AQ96AX1 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms