RNA–Protein interactions for RNA: ENST00000488210.1

LINC02006-201, Transcript of long intergenic non-protein coding RNA 2006, humanhuman

TSL 4 BASIC

Gene LINC02006, Length 524 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02006-201ENST00000488210 AEBP2Q6ZN18 517 aaPredicted RBP17.66■□□□□ 0.42
LINC02006-201ENST00000488210 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
LINC02006-201ENST00000488210 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
LINC02006-201ENST00000488210 SENP3Q9H4L4 574 aaPredicted RBP14.92□□□□□ -0.02
LINC02006-201ENST00000488210 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
LINC02006-201ENST00000488210 FOXD1Q16676 465 aa13.85□□□□□ -0.19
LINC02006-201ENST00000488210 NISCHQ9Y2I1 1504 aa13.79□□□□□ -0.2
LINC02006-201ENST00000488210 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
LINC02006-201ENST00000488210 ADRA2BP18089 450 aa13.35□□□□□ -0.27
LINC02006-201ENST00000488210 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
LINC02006-201ENST00000488210 KCNA4P22459 653 aa13.03□□□□□ -0.32
LINC02006-201ENST00000488210 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
LINC02006-201ENST00000488210 MSH5O43196 834 aa12.72□□□□□ -0.37
LINC02006-201ENST00000488210 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
LINC02006-201ENST00000488210 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
LINC02006-201ENST00000488210 PPP4R3CPQ6ZMV5 832 aa12.4□□□□□ -0.42
LINC02006-201ENST00000488210 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
LINC02006-201ENST00000488210 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
LINC02006-201ENST00000488210 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
LINC02006-201ENST00000488210 NPM3O75607 178 aaKnown RBP12.13□□□□□ -0.47
LINC02006-201ENST00000488210 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
LINC02006-201ENST00000488210 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
LINC02006-201ENST00000488210 ZBTB22O15209 634 aa12□□□□□ -0.49
LINC02006-201ENST00000488210 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.49
LINC02006-201ENST00000488210 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
LINC02006-201ENST00000488210 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
LINC02006-201ENST00000488210 HOXD11P31277 338 aaPredicted RBP11.79□□□□□ -0.52
LINC02006-201ENST00000488210 DNAJC5BQ9UF47 199 aa11.75□□□□□ -0.53
LINC02006-201ENST00000488210 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
LINC02006-201ENST00000488210 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
LINC02006-201ENST00000488210 AMER1Q5JTC6 1135 aaPredicted RBP11.73□□□□□ -0.53
LINC02006-201ENST00000488210 ABCC9O60706 1549 aa11.65□□□□□ -0.54
LINC02006-201ENST00000488210 ZCCHC6Q5VYS8 1495 aaKnown RBP11.53□□□□□ -0.56
LINC02006-201ENST00000488210 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
LINC02006-201ENST00000488210 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
LINC02006-201ENST00000488210 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
LINC02006-201ENST00000488210 NACADO15069 1562 aa11.4□□□□□ -0.58
LINC02006-201ENST00000488210 DCAF8L2P0C7V8 631 aa11.37□□□□□ -0.59
LINC02006-201ENST00000488210 RB1CC1Q8TDY2 1594 aa11.34□□□□□ -0.59
LINC02006-201ENST00000488210 FKBP8Q14318 412 aa11.33□□□□□ -0.6
LINC02006-201ENST00000488210 SLC4A2P04920 1241 aa11.29□□□□□ -0.6
LINC02006-201ENST00000488210 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
LINC02006-201ENST00000488210 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
LINC02006-201ENST00000488210 MYCNP04198 464 aaPredicted RBP11.18□□□□□ -0.62
LINC02006-201ENST00000488210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC02006-201ENST00000488210 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
LINC02006-201ENST00000488210 UNC13AQ9UPW8 1703 aa11.05□□□□□ -0.64
LINC02006-201ENST00000488210 U3KPZ7 1027 aaPredicted RBP11.01□□□□□ -0.65
LINC02006-201ENST00000488210 BICRAQ9NZM4 1560 aa10.99□□□□□ -0.65
LINC02006-201ENST00000488210 RNF39Q9H2S5 420 aa10.94□□□□□ -0.66
LINC02006-201ENST00000488210 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
LINC02006-201ENST00000488210 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC02006-201ENST00000488210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.85□□□□□ -0.67
LINC02006-201ENST00000488210 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
LINC02006-201ENST00000488210 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
LINC02006-201ENST00000488210 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
LINC02006-201ENST00000488210 C1QBPQ07021 282 aaKnown RBP10.8□□□□□ -0.68
LINC02006-201ENST00000488210 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
LINC02006-201ENST00000488210 APLP2Q06481 763 aa10.7□□□□□ -0.7
LINC02006-201ENST00000488210 FBXO3Q9UK99 471 aa10.7□□□□□ -0.7
LINC02006-201ENST00000488210 CECR2Q9BXF3 1484 aa10.69□□□□□ -0.7
LINC02006-201ENST00000488210 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
LINC02006-201ENST00000488210 BAZ1AQ9NRL2 1556 aaPredicted RBP10.67□□□□□ -0.7
LINC02006-201ENST00000488210 HAP1P54257 671 aaPredicted RBP10.65□□□□□ -0.7
LINC02006-201ENST00000488210 SPINK5Q9NQ38 1064 aaPredicted RBP10.64□□□□□ -0.71
LINC02006-201ENST00000488210 SMARCA4P51532 1647 aa10.63□□□□□ -0.71
LINC02006-201ENST00000488210 MROH2BQ7Z745 1585 aa10.6□□□□□ -0.71
LINC02006-201ENST00000488210 BCANQ96GW7 911 aa10.6□□□□□ -0.71
LINC02006-201ENST00000488210 RSF1Q96T23 1441 aaPredicted RBP10.58□□□□□ -0.72
LINC02006-201ENST00000488210 CC2D2AQ9P2K1 1620 aa10.57□□□□□ -0.72
LINC02006-201ENST00000488210 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
LINC02006-201ENST00000488210 ZNF219Q9P2Y4 722 aaPredicted RBP10.56□□□□□ -0.72
LINC02006-201ENST00000488210 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
LINC02006-201ENST00000488210 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
LINC02006-201ENST00000488210 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
LINC02006-201ENST00000488210 SMARCA2P51531 1590 aa10.54□□□□□ -0.72
LINC02006-201ENST00000488210 VASPP50552 380 aaPredicted RBP10.53□□□□□ -0.72
LINC02006-201ENST00000488210 NCAPD3P42695 1498 aa10.53□□□□□ -0.72
LINC02006-201ENST00000488210 CAPN15O75808 1086 aa10.52□□□□□ -0.73
LINC02006-201ENST00000488210 VSIG10Q8N0Z9 540 aa10.51□□□□□ -0.73
LINC02006-201ENST00000488210 TRHP20396 242 aaPredicted RBP10.49□□□□□ -0.73
LINC02006-201ENST00000488210 PROM2Q8N271 834 aa10.49□□□□□ -0.73
LINC02006-201ENST00000488210 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
LINC02006-201ENST00000488210 WIZO95785 1651 aa10.48□□□□□ -0.73
LINC02006-201ENST00000488210 CACNB1Q02641 598 aaPredicted RBP10.48□□□□□ -0.73
LINC02006-201ENST00000488210 HMGXB3Q12766 1538 aa10.48□□□□□ -0.73
LINC02006-201ENST00000488210 IFNLR1Q8IU57 520 aaPredicted RBP10.46□□□□□ -0.73
LINC02006-201ENST00000488210 BAZ1BQ9UIG0 1483 aaKnown RBP10.44□□□□□ -0.74
LINC02006-201ENST00000488210 DSG3P32926 999 aa10.43□□□□□ -0.74
LINC02006-201ENST00000488210 SUPT5HO00267 1087 aaKnown RBP10.42□□□□□ -0.74
LINC02006-201ENST00000488210 PKD2Q13563 968 aa10.42□□□□□ -0.74
LINC02006-201ENST00000488210 TOP2AP11388 1531 aaKnown RBP10.42□□□□□ -0.74
LINC02006-201ENST00000488210 MKRN4PQ13434 485 aaPredicted RBP10.41□□□□□ -0.74
LINC02006-201ENST00000488210 POLA2Q14181 598 aa10.39□□□□□ -0.75
LINC02006-201ENST00000488210 ABCB7O75027 752 aa10.33□□□□□ -0.76
LINC02006-201ENST00000488210 TPRNQ4KMQ1 711 aa10.33□□□□□ -0.76
LINC02006-201ENST00000488210 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.32□□□□□ -0.76
LINC02006-201ENST00000488210 KDM2AQ9Y2K7 1162 aa10.32□□□□□ -0.76
LINC02006-201ENST00000488210 FBLN2P98095 1184 aa10.31□□□□□ -0.76
LINC02006-201ENST00000488210 BBXQ8WY36 941 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms