Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.65□□□□□ -1.5
GPC4O75487 RN7SL570P-201ENST00000484405 292 ntBASIC5.65□□□□□ -1.5
GPC4O75487 AC009120.1-201ENST00000493458 473 ntBASIC5.65□□□□□ -1.5
GPC4O75487 NENFP3-201ENST00000503735 313 ntBASIC5.65□□□□□ -1.5
GPC4O75487 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.65□□□□□ -1.5
GPC4O75487 PCNAP1-201ENST00000505363 709 ntBASIC5.65□□□□□ -1.5
GPC4O75487 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC4O75487 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
GPC4O75487 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC4O75487 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.65□□□□□ -1.5
GPC4O75487 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.65□□□□□ -1.5
GPC4O75487 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC4O75487 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC4O75487 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC4O75487 AC092868.3-201ENST00000560515 784 ntBASIC5.65□□□□□ -1.5
GPC4O75487 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC4O75487 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GPC4O75487 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC4O75487 HMGB1P51-201ENST00000605166 638 ntBASIC5.65□□□□□ -1.5
GPC4O75487 AC138965.3-201ENST00000623875 498 ntBASIC5.65□□□□□ -1.5
GPC4O75487 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC4O75487 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC4O75487 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC4O75487 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.65□□□□□ -1.51
GPC4O75487 OR9K1P-202ENST00000641111 3217 ntBASIC5.65□□□□□ -1.51
GPC4O75487 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
GPC4O75487 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
GPC4O75487 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GPC4O75487 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GPC4O75487 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GPC4O75487 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC4O75487 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
GPC4O75487 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
GPC4O75487 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC4O75487 MUC2-202ENST00000613187 4845 ntBASIC5.64□□□□□ -1.51
GPC4O75487 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC4O75487 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GPC4O75487 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 AC003985.2-201ENST00000562268 1669 ntBASIC5.64□□□□□ -1.51
GPC4O75487 NAMPTP1-201ENST00000440465 2514 ntBASIC5.64□□□□□ -1.51
GPC4O75487 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 AL159987.1-201ENST00000347911 293 ntBASIC5.64□□□□□ -1.51
GPC4O75487 SNORA27.3-201ENST00000364937 134 ntBASIC5.64□□□□□ -1.51
GPC4O75487 RNU1-136P-201ENST00000384181 164 ntBASIC5.64□□□□□ -1.51
GPC4O75487 AC245060.4-201ENST00000413293 1121 ntBASIC5.64□□□□□ -1.51
GPC4O75487 NIFKP3-201ENST00000417799 865 ntBASIC5.64□□□□□ -1.51
GPC4O75487 AL121878.1-201ENST00000418638 859 ntBASIC5.64□□□□□ -1.51
GPC4O75487 RPS27AP6-201ENST00000427962 448 ntBASIC5.64□□□□□ -1.51
GPC4O75487 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 MTND2P40-201ENST00000436718 841 ntBASIC5.64□□□□□ -1.51
GPC4O75487 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC4O75487 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC4O75487 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC4O75487 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC4O75487 AL049829.1-201ENST00000465411 156 ntBASIC5.64□□□□□ -1.51
GPC4O75487 RPSAP37-201ENST00000470913 821 ntBASIC5.64□□□□□ -1.51
GPC4O75487 AC073610.1-201ENST00000489971 396 ntBASIC5.64□□□□□ -1.51
GPC4O75487 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC4O75487 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC4O75487 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC4O75487 RNU6-319P-201ENST00000516025 108 ntBASIC5.64□□□□□ -1.51
GPC4O75487 SCARNA6.1-201ENST00000516989 238 ntBASIC5.64□□□□□ -1.51
GPC4O75487 AC021678.3-201ENST00000517893 476 ntBASIC5.64□□□□□ -1.51
GPC4O75487 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC4O75487 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.64□□□□□ -1.51
GPC4O75487 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC4O75487 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC4O75487 AC027243.2-201ENST00000602530 724 ntBASIC5.64□□□□□ -1.51
GPC4O75487 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
GPC4O75487 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC4O75487 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC4O75487 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC4O75487 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC4O75487 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC4O75487 AC012078.1-201ENST00000405035 1646 ntBASIC5.63□□□□□ -1.51
GPC4O75487 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC4O75487 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC4O75487 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.63□□□□□ -1.51
GPC4O75487 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC4O75487 OR52B3P-201ENST00000314715 928 ntBASIC5.63□□□□□ -1.51
GPC4O75487 AC023490.2-201ENST00000359859 470 ntBASIC5.63□□□□□ -1.51
GPC4O75487 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.63□□□□□ -1.51
GPC4O75487 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.63□□□□□ -1.51
GPC4O75487 MIR130A-201ENST00000385274 89 ntBASIC5.63□□□□□ -1.51
GPC4O75487 RPS3AP2-201ENST00000407190 754 ntBASIC5.63□□□□□ -1.51
GPC4O75487 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.63□□□□□ -1.51
GPC4O75487 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.63□□□□□ -1.51
GPC4O75487 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.63□□□□□ -1.51
GPC4O75487 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.63□□□□□ -1.51
GPC4O75487 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms