Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 MIR3912-201ENST00000577566 105 ntBASIC8.14□□□□□ -1.11
ALDH1A1P00352 MIR548AB-201ENST00000584917 84 ntBASIC8.14□□□□□ -1.11
ALDH1A1P00352 AC010323.2-201ENST00000596405 594 ntBASIC8.14□□□□□ -1.11
ALDH1A1P00352 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 AC069304.2-201ENST00000605154 435 ntBASIC8.14□□□□□ -1.11
ALDH1A1P00352 AL031658.2-201ENST00000616850 651 ntBASIC8.14□□□□□ -1.11
ALDH1A1P00352 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ALDH1A1P00352 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ALDH1A1P00352 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ALDH1A1P00352 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ALDH1A1P00352 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ALDH1A1P00352 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ALDH1A1P00352 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.14□□□□□ -1.11
ALDH1A1P00352 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ALDH1A1P00352 AC090643.1-201ENST00000623600 3100 ntBASIC8.14□□□□□ -1.11
ALDH1A1P00352 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 CASC19-206ENST00000641028 1430 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AL008638.3-201ENST00000623027 5182 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 MIR365B-201ENST00000362317 111 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 PSMA6P1-201ENST00000400275 741 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 RNA5SP431-201ENST00000410312 120 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC104843.2-201ENST00000427666 297 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 HMGB3P9-201ENST00000441799 583 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 FAR2P1-206ENST00000449736 709 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 BX842559.2-201ENST00000451418 605 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 RN7SL362P-201ENST00000494228 267 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC022296.2-201ENST00000512424 202 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 RPL10P18-201ENST00000519384 309 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 GTF2IP22-201ENST00000554443 182 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC009220.3-201ENST00000604318 586 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC016405.2-201ENST00000607393 312 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 RN7SL261P-201ENST00000613441 282 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 AC018816.2-201ENST00000621460 353 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 OR52B5P-202ENST00000641118 1110 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 MTCO1P11-201ENST00000429111 1528 ntBASIC8.13□□□□□ -1.11
ALDH1A1P00352 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC8.13□□□□□ -1.11
ALDH1A1P00352 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.13□□□□□ -1.11
ALDH1A1P00352 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ALDH1A1P00352 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ALDH1A1P00352 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ALDH1A1P00352 AC012513.3-201ENST00000623250 2116 ntBASIC8.12□□□□□ -1.11
ALDH1A1P00352 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.12□□□□□ -1.11
ALDH1A1P00352 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ALDH1A1P00352 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ALDH1A1P00352 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
ALDH1A1P00352 AC131649.2-201ENST00000624925 4439 ntBASIC8.12□□□□□ -1.11
ALDH1A1P00352 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ALDH1A1P00352 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ALDH1A1P00352 TMCC1P1-201ENST00000518897 1980 ntBASIC8.12□□□□□ -1.11
ALDH1A1P00352 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.12□□□□□ -1.11
ALDH1A1P00352 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ALDH1A1P00352 PABPC1P9-201ENST00000426076 1612 ntBASIC8.12□□□□□ -1.11
ALDH1A1P00352 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms