Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AL136131.3-201ENST00000607600 188 ntBASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 AL135999.3-201ENST00000610501 812 ntBASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 MIR6885-201ENST00000612241 66 ntBASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 AC015922.4-201ENST00000612568 690 ntBASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC3.69□□□□□ -1.82
SND1-IT1Q9HBX3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 MRRFP1-201ENST00000435941 1675 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC233289.1-201ENST00000403700 508 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AL133260.1-201ENST00000405720 405 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 RNA5SP198-201ENST00000410376 127 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 RNA5SP231-201ENST00000410496 138 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 RN7SKP29-201ENST00000410957 272 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 CTSL3P-202ENST00000412179 788 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 HSD17B7P1-201ENST00000412419 1017 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 NPM1P40-201ENST00000412758 733 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 NIFKP3-201ENST00000417799 865 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 RCC2P2-201ENST00000422174 918 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC099782.1-201ENST00000425889 474 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC007679.3-201ENST00000434035 414 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC016772.1-201ENST00000444170 1261 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 GEMIN2P1-201ENST00000454246 752 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 SEPT7P6-201ENST00000469999 1143 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 RN7SL273P-201ENST00000481561 299 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 MTCO3P42-201ENST00000509488 518 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC016559.2-201ENST00000510759 359 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 MTCO3P39-201ENST00000514812 518 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC138517.1-201ENST00000515724 568 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 RN7SKP253-201ENST00000516424 309 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 FTH1P11-201ENST00000517577 551 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 CDC42P3-201ENST00000518493 633 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC009879.1-201ENST00000520029 839 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC018442.3-201ENST00000523025 183 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AP005119.1-201ENST00000580956 292 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 MIR4260-201ENST00000583107 67 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC068768.2-201ENST00000602352 343 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC012676.3-201ENST00000614983 479 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC090607.5-201ENST00000615692 224 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC010266.2-201ENST00000564741 3255 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 PSG10P-201ENST00000501199 1500 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AL356317.1-201ENST00000396110 1436 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 AC027088.4-201ENST00000611559 1947 ntBASIC3.68□□□□□ -1.82
SND1-IT1Q9HBX3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms