Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RN7SL284P-201ENST00000498823 275 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 IGHV4-55-201ENST00000520889 368 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC136777.2-201ENST00000522979 358 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 HAUS1P3-201ENST00000523909 662 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 OR7E128P-201ENST00000532736 1024 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC124891.1-201ENST00000536322 519 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC135279.1-201ENST00000543493 504 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 TDGP1-201ENST00000543961 1229 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC020916.2-201ENST00000591242 360 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC015982.1-201ENST00000608113 465 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 uc_338.29-201ENST00000615099 168 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC231759.1-201ENST00000616455 597 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC022400.9-201ENST00000623633 273 ntBASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.75□□□□□ -1.49
AMBRA1Q9C0C7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 MFSD8-213ENST00000641134 1327 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 SMG1P5-202ENST00000529428 4219 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 SMG1P2-201ENST00000566127 4221 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 CASC19-260ENST00000641828 2001 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 RNU6-316P-201ENST00000391027 107 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 RNU2-17P-201ENST00000410290 190 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC010099.3-201ENST00000423896 409 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 IGLV3-4-201ENST00000432300 244 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 SNRPFP2-201ENST00000440710 251 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC092647.3-201ENST00000443044 633 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 OR2L9P-201ENST00000444456 913 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 SETD6P1-201ENST00000444575 317 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AP000563.1-201ENST00000490865 758 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC113367.2-201ENST00000505749 160 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC021146.7-201ENST00000509604 775 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC093664.1-201ENST00000511779 289 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 GTF2IP11-201ENST00000526931 420 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC244502.2-201ENST00000543361 851 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AL121839.1-201ENST00000556233 1185 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC134669.1-201ENST00000581275 672 ntBASIC5.74□□□□□ -1.49
AMBRA1Q9C0C7 AC064807.4-201ENST00000607201 407 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 325 ms