Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
LRFN1Q9P244 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LRFN1Q9P244 AL391261.1-201ENST00000555712 1479 ntBASIC5.71□□□□□ -1.49
LRFN1Q9P244 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
LRFN1Q9P244 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AL354854.1-201ENST00000455940 1363 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 SNORA21-201ENST00000362423 132 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 RNA5SP110-201ENST00000362638 115 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 RNU1-134P-201ENST00000362935 165 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 RNA5SP156-201ENST00000410250 110 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 HMGB3P31-201ENST00000413333 595 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 UBE2V1P14-201ENST00000415815 558 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 RPS7P8-201ENST00000418311 581 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 RPS7P2-201ENST00000435134 607 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC002553.3-201ENST00000453002 341 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC093890.1-201ENST00000502554 540 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 EIF4A2P5-201ENST00000529914 499 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 AP001858.2-201ENST00000536213 601 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC079905.1-201ENST00000549280 475 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 OR11H3P-201ENST00000554547 982 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC233702.7-202ENST00000582941 211 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC245884.10-201ENST00000597355 337 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC016597.2-201ENST00000613256 341 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC022960.3-201ENST00000619794 441 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 SNX18P12-201ENST00000624821 759 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 MTCO1P18-201ENST00000455518 1419 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 GUCY1B2-204ENST00000531898 1979 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 AL645568.2-201ENST00000432815 1337 ntBASIC5.71□□□□□ -1.5
LRFN1Q9P244 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.71□□□□□ -1.5
LRFN1Q9P244 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRFN1Q9P244 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AC005618.1-201ENST00000606901 3148 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 HSPA8P17-201ENST00000427029 1382 ntBASIC5.7□□□□□ -1.5
LRFN1Q9P244 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.7□□□□□ -1.5
LRFN1Q9P244 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRFN1Q9P244 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms