Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 CASC19-260ENST00000641828 2001 ntBASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM55Q9BYV6 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 AC096992.2-201ENST00000609553 1684 ntBASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 AC011504.1-201ENST00000623331 4103 ntBASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 AP003486.1-201ENST00000525716 3994 ntBASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.71□□□□□ -1.33
TRIM55Q9BYV6 AC007159.1-201ENST00000566529 4706 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 IGKV7-3-201ENST00000357453 298 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 RNU6-707P-201ENST00000364647 95 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 Y_RNA.465-201ENST00000384293 102 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 MIR99A-201ENST00000384906 81 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AL136100.1-201ENST00000407696 330 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 MIR1303-201ENST00000408625 86 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 PTP4A1P5-201ENST00000420305 455 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 RPL21P43-201ENST00000425440 472 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC245452.2-201ENST00000435222 392 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AL117351.1-201ENST00000438864 766 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC083855.1-201ENST00000440041 258 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 HMGB1P48-201ENST00000446155 598 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AL606490.1-201ENST00000452266 765 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 RPL31P11-202ENST00000454082 372 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AL355032.1-201ENST00000472981 438 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC091982.1-202ENST00000473923 343 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC126121.1-201ENST00000482313 553 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 OR9A1P-202ENST00000484361 945 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 RN7SL350P-201ENST00000492591 299 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 NDUFB4P12-201ENST00000513465 390 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 IGJP1-201ENST00000522682 475 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 IGLV3-6-201ENST00000523937 250 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC010198.2-201ENST00000550612 259 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC087465.1-201ENST00000560574 245 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC010287.1-201ENST00000566916 357 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 MIR4428-201ENST00000584884 73 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 RPS27AP19-201ENST00000597285 458 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC015819.1-201ENST00000613588 663 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC009090.3-201ENST00000616553 565 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC012254.5-201ENST00000623573 478 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 AC103706.2-201ENST00000638080 240 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM55Q9BYV6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms