Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MAPK10-344ENST00000641718 3746 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 RNU1-16P-201ENST00000365477 164 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 MT-TR-201ENST00000387439 65 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 HMGB3P1-201ENST00000393368 573 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AL109918.1-202ENST00000406724 436 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 SEPT7P8-201ENST00000413308 775 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 RANP6-201ENST00000413691 644 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 ARMC8P1-201ENST00000443069 1289 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 RPL7P36-201ENST00000444633 681 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AL050341.1-201ENST00000447743 313 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 DDX39BP2-208ENST00000453923 258 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 BZW1P1-201ENST00000454901 1240 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 PMCHL2-203ENST00000457791 237 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AL122013.1-201ENST00000473054 801 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 RN7SL153P-201ENST00000486501 292 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC073358.1-201ENST00000505671 684 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC010409.2-201ENST00000505780 478 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC092868.1-201ENST00000557949 802 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 OR4K7P-201ENST00000580232 945 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC011193.2-201ENST00000582638 367 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC016629.2-201ENST00000597341 199 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AL451085.1-201ENST00000604546 690 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 MARK3P1-201ENST00000604796 643 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC011373.1-201ENST00000607270 237 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 MIR6774-201ENST00000614651 70 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AC103564.3-201ENST00000621194 220 ntBASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
FOXR1Q6PIV2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 AP003175.1-201ENST00000641383 6658 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 RNU6-353P-201ENST00000364266 108 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 RN7SKP50-201ENST00000364694 315 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 RNU1-11P-201ENST00000383975 164 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 RPS15AP38-201ENST00000413110 372 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 AC073464.1-201ENST00000429823 534 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 GAPDHP32-201ENST00000433816 998 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 AL158214.1-201ENST00000444423 404 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 PSPHP1-201ENST00000450062 261 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 TCEAL4P1-201ENST00000453620 588 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 RNU7-140P-201ENST00000459546 60 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 WBP1LP4-201ENST00000505043 344 ntBASIC7.55□□□□□ -1.2
FOXR1Q6PIV2 MRPL49P1-201ENST00000505951 535 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms