Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RN7SKP15-201ENST00000364742 309 ntBASIC5.47□□□□□ -1.53
RPA3P35244 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.47□□□□□ -1.53
RPA3P35244 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RPA3P35244 SNORA48.4-201ENST00000391089 134 ntBASIC5.47□□□□□ -1.53
RPA3P35244 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.47□□□□□ -1.53
RPA3P35244 MTND6P12-201ENST00000428247 522 ntBASIC5.47□□□□□ -1.53
RPA3P35244 RPL12P11-201ENST00000439970 501 ntBASIC5.47□□□□□ -1.53
RPA3P35244 AC005297.1-201ENST00000444765 862 ntBASIC5.47□□□□□ -1.53
RPA3P35244 AC021660.1-201ENST00000465006 554 ntBASIC5.47□□□□□ -1.53
RPA3P35244 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.47□□□□□ -1.53
RPA3P35244 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.47□□□□□ -1.53
RPA3P35244 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.47□□□□□ -1.53
RPA3P35244 OR8G3P-201ENST00000533406 921 ntBASIC5.47□□□□□ -1.53
RPA3P35244 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.47□□□□□ -1.53
RPA3P35244 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.47□□□□□ -1.53
RPA3P35244 DPPA2P4-201ENST00000563717 878 ntBASIC5.47□□□□□ -1.53
RPA3P35244 AC127024.5-201ENST00000580085 462 ntBASIC5.47□□□□□ -1.53
RPA3P35244 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.47□□□□□ -1.53
RPA3P35244 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.47□□□□□ -1.53
RPA3P35244 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.47□□□□□ -1.53
RPA3P35244 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RPA3P35244 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.47□□□□□ -1.53
RPA3P35244 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.47□□□□□ -1.53
RPA3P35244 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RPA3P35244 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
RPA3P35244 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.46□□□□□ -1.54
RPA3P35244 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.46□□□□□ -1.54
RPA3P35244 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
RPA3P35244 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RPA3P35244 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 TMSB4XP4-201ENST00000323496 618 ntBASIC5.46□□□□□ -1.54
RPA3P35244 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 RN7SKP292-201ENST00000365522 317 ntBASIC5.46□□□□□ -1.54
RPA3P35244 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RPA3P35244 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.46□□□□□ -1.54
RPA3P35244 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.46□□□□□ -1.54
RPA3P35244 AC093155.2-201ENST00000420734 937 ntBASIC5.46□□□□□ -1.54
RPA3P35244 AC113412.1-201ENST00000425840 504 ntBASIC5.46□□□□□ -1.54
RPA3P35244 AL662874.1-201ENST00000426065 230 ntBASIC5.46□□□□□ -1.54
RPA3P35244 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RPA3P35244 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.46□□□□□ -1.54
RPA3P35244 AL590399.4-201ENST00000436561 601 ntBASIC5.46□□□□□ -1.54
RPA3P35244 AC064862.4-201ENST00000442180 334 ntBASIC5.46□□□□□ -1.54
RPA3P35244 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RPA3P35244 COX6B1P2-201ENST00000489624 230 ntBASIC5.46□□□□□ -1.54
RPA3P35244 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 UGT2A3P7-201ENST00000510485 734 ntBASIC5.46□□□□□ -1.54
RPA3P35244 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.46□□□□□ -1.54
RPA3P35244 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.46□□□□□ -1.54
RPA3P35244 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.46□□□□□ -1.54
RPA3P35244 AC114947.2-201ENST00000565748 2125 ntBASIC5.46□□□□□ -1.54
RPA3P35244 AC009852.2-201ENST00000567898 485 ntBASIC5.46□□□□□ -1.54
RPA3P35244 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 AP000769.2-201ENST00000602344 396 ntBASIC5.46□□□□□ -1.54
RPA3P35244 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.46□□□□□ -1.54
RPA3P35244 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.46□□□□□ -1.54
RPA3P35244 AL357153.4-201ENST00000620487 1016 ntBASIC5.46□□□□□ -1.54
RPA3P35244 AC127024.6-201ENST00000621598 424 ntBASIC5.46□□□□□ -1.54
RPA3P35244 AC063952.1-203ENST00000634410 658 ntBASIC5.46□□□□□ -1.54
RPA3P35244 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RPA3P35244 MTND5P12-201ENST00000502851 1449 ntBASIC5.46□□□□□ -1.54
RPA3P35244 SRRM1P3-201ENST00000426911 2678 ntBASIC5.46□□□□□ -1.54
RPA3P35244 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.46□□□□□ -1.54
RPA3P35244 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RPA3P35244 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RPA3P35244 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.46□□□□□ -1.54
RPA3P35244 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPA3P35244 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.46□□□□□ -1.54
RPA3P35244 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RPA3P35244 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.45□□□□□ -1.54
RPA3P35244 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 THAP12P5-201ENST00000405864 2275 ntBASIC5.45□□□□□ -1.54
RPA3P35244 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RPA3P35244 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RPA3P35244 AL162456.1-201ENST00000634535 2006 ntBASIC5.45□□□□□ -1.54
RPA3P35244 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.45□□□□□ -1.54
RPA3P35244 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
RPA3P35244 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RPA3P35244 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RPA3P35244 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms