Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA4P51532 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC9.4□□□□□ -0.9
SMARCA4P51532 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
SMARCA4P51532 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA4P51532 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA4P51532 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SMARCA4P51532 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SMARCA4P51532 AL359715.3-201ENST00000569267 2123 ntBASIC9.4□□□□□ -0.91
SMARCA4P51532 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SMARCA4P51532 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMARCA4P51532 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC9.4□□□□□ -0.91
SMARCA4P51532 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMARCA4P51532 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMARCA4P51532 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
SMARCA4P51532 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
SMARCA4P51532 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
SMARCA4P51532 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC9.39□□□□□ -0.91
SMARCA4P51532 AL354714.3-201ENST00000447284 493 ntBASIC9.39□□□□□ -0.91
SMARCA4P51532 NUTF2P7-201ENST00000453086 375 ntBASIC9.39□□□□□ -0.91
SMARCA4P51532 AC006427.1-201ENST00000514359 712 ntBASIC9.39□□□□□ -0.91
SMARCA4P51532 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC9.39□□□□□ -0.91
SMARCA4P51532 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC9.39□□□□□ -0.91
SMARCA4P51532 AC136624.4-201ENST00000573044 370 ntBASIC9.39□□□□□ -0.91
SMARCA4P51532 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC9.39□□□□□ -0.91
SMARCA4P51532 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SMARCA4P51532 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
SMARCA4P51532 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC9.39□□□□□ -0.91
SMARCA4P51532 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC9.39□□□□□ -0.91
SMARCA4P51532 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.39□□□□□ -0.91
SMARCA4P51532 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
SMARCA4P51532 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMARCA4P51532 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMARCA4P51532 RNU1-59P-201ENST00000364829 162 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 AC068587.1-201ENST00000483613 781 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC9.38□□□□□ -0.91
SMARCA4P51532 MRPS33P2-201ENST00000507850 322 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 HPRT1P1-201ENST00000509498 657 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC9.38□□□□□ -0.91
SMARCA4P51532 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC9.38□□□□□ -0.91
SMARCA4P51532 U1.25-201ENST00000614085 162 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 U1.34-201ENST00000618578 162 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 U1.31-201ENST00000620022 160 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 AP003400.3-201ENST00000624904 346 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
SMARCA4P51532 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMARCA4P51532 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC9.38□□□□□ -0.91
SMARCA4P51532 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMARCA4P51532 UGT2B24P-201ENST00000514441 1597 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC9.38□□□□□ -0.91
SMARCA4P51532 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SMARCA4P51532 AL158152.1-201ENST00000602652 1435 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMARCA4P51532 SNORA62-201ENST00000365493 153 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 HMGB3P7-201ENST00000400214 611 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 RNU2-50P-201ENST00000410494 143 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC9.38□□□□□ -0.91
SMARCA4P51532 BX323845.1-201ENST00000432417 179 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 OR7E125P-201ENST00000443450 846 ntBASIC9.38□□□□□ -0.91
SMARCA4P51532 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC9.38□□□□□ -0.91
SMARCA4P51532 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC9.38□□□□□ -0.91
SMARCA4P51532 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC9.38□□□□□ -0.91
SMARCA4P51532 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC9.38□□□□□ -0.91
SMARCA4P51532 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC9.38□□□□□ -0.91
SMARCA4P51532 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SMARCA4P51532 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMARCA4P51532 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SMARCA4P51532 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
SMARCA4P51532 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC9.37□□□□□ -0.91
SMARCA4P51532 USP8-204ENST00000425032 3559 ntTSL 2 BASIC9.37□□□□□ -0.91
SMARCA4P51532 ZNF969P-201ENST00000510345 2341 ntBASIC9.37□□□□□ -0.91
SMARCA4P51532 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC9.37□□□□□ -0.91
SMARCA4P51532 ATP5A1P4-201ENST00000556888 1605 ntBASIC9.37□□□□□ -0.91
SMARCA4P51532 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SMARCA4P51532 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC9.37□□□□□ -0.91
SMARCA4P51532 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SMARCA4P51532 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC9.37□□□□□ -0.91
SMARCA4P51532 RPL23AP17-201ENST00000401064 499 ntBASIC9.37□□□□□ -0.91
SMARCA4P51532 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SMARCA4P51532 OR5M12P-201ENST00000423388 929 ntBASIC9.37□□□□□ -0.91
SMARCA4P51532 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC9.37□□□□□ -0.91
SMARCA4P51532 REG1CP-206ENST00000447469 496 ntBASIC9.37□□□□□ -0.91
SMARCA4P51532 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC9.37□□□□□ -0.91
SMARCA4P51532 AC134698.5-201ENST00000519444 336 ntBASIC9.37□□□□□ -0.91
SMARCA4P51532 AC008147.3-201ENST00000548666 354 ntBASIC9.37□□□□□ -0.91
SMARCA4P51532 AL512782.1-201ENST00000603093 364 ntBASIC9.37□□□□□ -0.91
SMARCA4P51532 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC9.37□□□□□ -0.91
SMARCA4P51532 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
SMARCA4P51532 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC9.37□□□□□ -0.91
SMARCA4P51532 NEK3-211ENST00000629912 141 ntTSL 5 BASIC9.37□□□□□ -0.91
SMARCA4P51532 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SMARCA4P51532 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMARCA4P51532 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMARCA4P51532 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMARCA4P51532 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SMARCA4P51532 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SMARCA4P51532 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC9.36□□□□□ -0.91
SMARCA4P51532 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SMARCA4P51532 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMARCA4P51532 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SMARCA4P51532 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms