RNA–Protein interactions for RNA: ENST00000624904.1

AP003400.3-201, humanhuman

BASIC

Gene AP003400.3, Length 346 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003400.3-201ENST00000624904 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
AP003400.3-201ENST00000624904 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
AP003400.3-201ENST00000624904 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
AP003400.3-201ENST00000624904 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
AP003400.3-201ENST00000624904 FOXD1Q16676 465 aa16.94■□□□□ 0.3
AP003400.3-201ENST00000624904 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
AP003400.3-201ENST00000624904 PPP6R1Q9UPN7 881 aa16.19■□□□□ 0.18
AP003400.3-201ENST00000624904 ADRA2BP18089 450 aa16.14■□□□□ 0.17
AP003400.3-201ENST00000624904 PIAS4Q8N2W9 510 aaPredicted RBP15.89■□□□□ 0.13
AP003400.3-201ENST00000624904 MSH5O43196 834 aa15.6■□□□□ 0.09
AP003400.3-201ENST00000624904 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
AP003400.3-201ENST00000624904 PPP4R3CPQ6ZMV5 832 aa14.71□□□□□ -0.05
AP003400.3-201ENST00000624904 POTEDQ86YR6 584 aa14.66□□□□□ -0.06
AP003400.3-201ENST00000624904 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
AP003400.3-201ENST00000624904 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
AP003400.3-201ENST00000624904 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
AP003400.3-201ENST00000624904 KCNA4P22459 653 aa14.18□□□□□ -0.14
AP003400.3-201ENST00000624904 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
AP003400.3-201ENST00000624904 HOXD11P31277 338 aaPredicted RBP14.09□□□□□ -0.15
AP003400.3-201ENST00000624904 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
AP003400.3-201ENST00000624904 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
AP003400.3-201ENST00000624904 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
AP003400.3-201ENST00000624904 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
AP003400.3-201ENST00000624904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
AP003400.3-201ENST00000624904 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
AP003400.3-201ENST00000624904 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
AP003400.3-201ENST00000624904 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
AP003400.3-201ENST00000624904 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
AP003400.3-201ENST00000624904 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
AP003400.3-201ENST00000624904 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
AP003400.3-201ENST00000624904 ZBTB22O15209 634 aa13.09□□□□□ -0.31
AP003400.3-201ENST00000624904 FOXD4L1Q9NU39 408 aa13.05□□□□□ -0.32
AP003400.3-201ENST00000624904 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
AP003400.3-201ENST00000624904 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
AP003400.3-201ENST00000624904 EHMT2Q96KQ7 1210 aa12.86□□□□□ -0.35
AP003400.3-201ENST00000624904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
AP003400.3-201ENST00000624904 CAPN15O75808 1086 aa12.85□□□□□ -0.35
AP003400.3-201ENST00000624904 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
AP003400.3-201ENST00000624904 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
AP003400.3-201ENST00000624904 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
AP003400.3-201ENST00000624904 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
AP003400.3-201ENST00000624904 APLP2Q06481 763 aa12.74□□□□□ -0.37
AP003400.3-201ENST00000624904 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
AP003400.3-201ENST00000624904 DSG3P32926 999 aa12.7□□□□□ -0.38
AP003400.3-201ENST00000624904 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
AP003400.3-201ENST00000624904 ABCB7O75027 752 aa12.64□□□□□ -0.39
AP003400.3-201ENST00000624904 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
AP003400.3-201ENST00000624904 POLA2Q14181 598 aa12.49□□□□□ -0.41
AP003400.3-201ENST00000624904 NISCHQ9Y2I1 1504 aa12.21□□□□□ -0.45
AP003400.3-201ENST00000624904 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
AP003400.3-201ENST00000624904 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
AP003400.3-201ENST00000624904 OSCARQ8IYS5 282 aa12.11□□□□□ -0.47
AP003400.3-201ENST00000624904 FBLN2P98095 1184 aa12.07□□□□□ -0.48
AP003400.3-201ENST00000624904 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
AP003400.3-201ENST00000624904 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
AP003400.3-201ENST00000624904 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
AP003400.3-201ENST00000624904 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
AP003400.3-201ENST00000624904 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
AP003400.3-201ENST00000624904 ZNF692Q9BU19 519 aaPredicted RBP11.83□□□□□ -0.52
AP003400.3-201ENST00000624904 SSUH2Q9Y2M2 353 aa11.8□□□□□ -0.52
AP003400.3-201ENST00000624904 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
AP003400.3-201ENST00000624904 SPDYE4A6NLX3 237 aa11.71□□□□□ -0.53
AP003400.3-201ENST00000624904 PABPN1Q86U42 306 aaKnown RBP eCLIP11.69□□□□□ -0.54
AP003400.3-201ENST00000624904 PITPNM1O00562 1244 aa11.67□□□□□ -0.54
AP003400.3-201ENST00000624904 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
AP003400.3-201ENST00000624904 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
AP003400.3-201ENST00000624904 FKBP8Q14318 412 aa11.57□□□□□ -0.56
AP003400.3-201ENST00000624904 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
AP003400.3-201ENST00000624904 POTEHQ6S545 545 aa11.54□□□□□ -0.56
AP003400.3-201ENST00000624904 PROM2Q8N271 834 aa11.49□□□□□ -0.57
AP003400.3-201ENST00000624904 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
AP003400.3-201ENST00000624904 FXR2P51116 673 aaKnown RBP eCLIP11.47□□□□□ -0.57
AP003400.3-201ENST00000624904 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
AP003400.3-201ENST00000624904 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
AP003400.3-201ENST00000624904 PRKAR2AP13861 404 aaKnown RBP11.36□□□□□ -0.59
AP003400.3-201ENST00000624904 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
AP003400.3-201ENST00000624904 CREBZFQ9NS37 354 aa11.27□□□□□ -0.61
AP003400.3-201ENST00000624904 FARP1Q9Y4F1 1045 aaPredicted RBP11.18□□□□□ -0.62
AP003400.3-201ENST00000624904 HAX1O00165 279 aa11.16□□□□□ -0.62
AP003400.3-201ENST00000624904 EVX2Q03828 476 aa11.15□□□□□ -0.62
AP003400.3-201ENST00000624904 MNX1P50219 401 aaPredicted RBP11.14□□□□□ -0.63
AP003400.3-201ENST00000624904 MIER1Q8N108 512 aa11.12□□□□□ -0.63
AP003400.3-201ENST00000624904 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
AP003400.3-201ENST00000624904 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
AP003400.3-201ENST00000624904 PLCD3Q8N3E9 789 aa11.07□□□□□ -0.64
AP003400.3-201ENST00000624904 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
AP003400.3-201ENST00000624904 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
AP003400.3-201ENST00000624904 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
AP003400.3-201ENST00000624904 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
AP003400.3-201ENST00000624904 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
AP003400.3-201ENST00000624904 ZRANB1Q9UGI0 708 aa10.93□□□□□ -0.66
AP003400.3-201ENST00000624904 IFNLR1Q8IU57 520 aaPredicted RBP10.92□□□□□ -0.66
AP003400.3-201ENST00000624904 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
AP003400.3-201ENST00000624904 NUBP1P53384 320 aa10.89□□□□□ -0.67
AP003400.3-201ENST00000624904 TSPYL2Q9H2G4 693 aaPredicted RBP10.89□□□□□ -0.67
AP003400.3-201ENST00000624904 ZBTB47Q9UFB7 747 aaPredicted RBP10.88□□□□□ -0.67
AP003400.3-201ENST00000624904 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
AP003400.3-201ENST00000624904 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
AP003400.3-201ENST00000624904 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
AP003400.3-201ENST00000624904 GABBR2O75899 941 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms