Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
RTCBQ9Y3I0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 AL441883.1-201ENST00000566170 1045 ntBASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 AL023973.1-201ENST00000624619 620 ntBASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 TMEM179-206ENST00000616017 1645 ntBASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
RTCBQ9Y3I0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 AL450487.1-201ENST00000426799 995 ntBASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 AC005332.1-201ENST00000577698 1310 ntBASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RTCBQ9Y3I0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 AC116407.4-201ENST00000623319 1061 ntBASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.83■■□□□ 1.57
RTCBQ9Y3I0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.83■■□□□ 1.56
RTCBQ9Y3I0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 AC026396.1-201ENST00000419388 421 ntBASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 CA15P1-201ENST00000481698 905 ntBASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.82■■□□□ 1.56
RTCBQ9Y3I0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 HCG4P8-203ENST00000443049 980 ntBASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 AC008622.2-201ENST00000617006 1229 ntBASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RTCBQ9Y3I0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 KRT8P8-201ENST00000434750 1448 ntBASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 PRSS44-201ENST00000515154 1146 ntBASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 AC092720.2-201ENST00000602388 1665 ntBASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RTCBQ9Y3I0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms