Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX6Q9UPM6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.56■□□□□ 0.56
LHX6Q9UPM6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 AC097488.1-201ENST00000507834 756 ntBASIC18.56■□□□□ 0.56
LHX6Q9UPM6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 PRELID1P1-202ENST00000567272 903 ntBASIC18.56■□□□□ 0.56
LHX6Q9UPM6 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 DGCR10-201ENST00000609839 495 ntBASIC18.56■□□□□ 0.56
LHX6Q9UPM6 AC130371.2-201ENST00000619443 611 ntBASIC18.56■□□□□ 0.56
LHX6Q9UPM6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LHX6Q9UPM6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 FAAHP1-202ENST00000446499 1238 ntBASIC18.55■□□□□ 0.56
LHX6Q9UPM6 AL359075.1-203ENST00000462729 1002 ntBASIC18.55■□□□□ 0.56
LHX6Q9UPM6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 AL356652.1-201ENST00000615962 565 ntBASIC18.55■□□□□ 0.56
LHX6Q9UPM6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX6Q9UPM6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 VENTXP5-201ENST00000523979 775 ntBASIC18.54■□□□□ 0.56
LHX6Q9UPM6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.54■□□□□ 0.56
LHX6Q9UPM6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 MESTP1-201ENST00000404287 994 ntBASIC18.53■□□□□ 0.56
LHX6Q9UPM6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
LHX6Q9UPM6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.52■□□□□ 0.56
LHX6Q9UPM6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms