Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 AC026271.3-201ENST00000571884 352 ntBASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 PKD1P6-201ENST00000343738 4769 ntBASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
DENND2AQ9ULE3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 AP000525.1-201ENST00000608286 694 ntBASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DENND2AQ9ULE3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 AC004980.1-204ENST00000429707 299 ntBASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.79■■□□□ 1.4
DENND2AQ9ULE3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 AC112907.3-201ENST00000577781 2400 ntBASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 AC131212.4-201ENST00000623606 975 ntBASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 FSCN1P1-201ENST00000568912 1481 ntBASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DENND2AQ9ULE3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 HLA-A-209ENST00000638375 975 ntBASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DENND2AQ9ULE3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 MESTP1-201ENST00000404287 994 ntBASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 MIR1238-201ENST00000408483 83 ntBASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
DENND2AQ9ULE3 MIR6786-201ENST00000616843 113 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms