Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPUSD1Q9UJJ7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPUSD1Q9UJJ7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 AP001271.2-201ENST00000624018 1556 ntBASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.3■□□□□ 0.2
RPUSD1Q9UJJ7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 AP006587.1-201ENST00000534129 1502 ntBASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPUSD1Q9UJJ7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 AC004264.1-201ENST00000608354 794 ntBASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 AC066615.1-201ENST00000640911 628 ntBASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.28■□□□□ 0.2
RPUSD1Q9UJJ7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPUSD1Q9UJJ7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.27■□□□□ 0.2
RPUSD1Q9UJJ7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.27■□□□□ 0.2
RPUSD1Q9UJJ7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.27■□□□□ 0.2
RPUSD1Q9UJJ7 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.27■□□□□ 0.2
RPUSD1Q9UJJ7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPUSD1Q9UJJ7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPUSD1Q9UJJ7 KRT16P5-201ENST00000455284 522 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms