Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRFN1Q9P244 AC133561.5-201ENST00000635547 218 ntBASIC18.02■□□□□ 0.48
LRFN1Q9P244 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRFN1Q9P244 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRFN1Q9P244 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRFN1Q9P244 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
LRFN1Q9P244 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.02■□□□□ 0.47
LRFN1Q9P244 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
LRFN1Q9P244 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRFN1Q9P244 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.02■□□□□ 0.47
LRFN1Q9P244 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRFN1Q9P244 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
LRFN1Q9P244 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRFN1Q9P244 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 REXO1L10P-201ENST00000615707 1290 ntBASIC18.01■□□□□ 0.47
LRFN1Q9P244 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.01■□□□□ 0.47
LRFN1Q9P244 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRFN1Q9P244 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LRFN1Q9P244 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LRFN1Q9P244 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRFN1Q9P244 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
LRFN1Q9P244 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LRFN1Q9P244 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LRFN1Q9P244 UNC93B2-201ENST00000285383 730 ntBASIC18■□□□□ 0.47
LRFN1Q9P244 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRFN1Q9P244 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18■□□□□ 0.47
LRFN1Q9P244 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRFN1Q9P244 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18■□□□□ 0.47
LRFN1Q9P244 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18■□□□□ 0.47
LRFN1Q9P244 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18■□□□□ 0.47
LRFN1Q9P244 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18■□□□□ 0.47
LRFN1Q9P244 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18■□□□□ 0.47
LRFN1Q9P244 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRFN1Q9P244 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18■□□□□ 0.47
LRFN1Q9P244 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18■□□□□ 0.47
LRFN1Q9P244 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LRFN1Q9P244 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRFN1Q9P244 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LRFN1Q9P244 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18■□□□□ 0.47
LRFN1Q9P244 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRFN1Q9P244 MMP23A-201ENST00000234610 1017 ntBASIC17.99■□□□□ 0.47
LRFN1Q9P244 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRFN1Q9P244 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRFN1Q9P244 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 AL031985.4-201ENST00000642138 673 ntBASIC17.99■□□□□ 0.47
LRFN1Q9P244 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRFN1Q9P244 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRFN1Q9P244 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRFN1Q9P244 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.99■□□□□ 0.47
LRFN1Q9P244 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 AC138932.1-201ENST00000534164 6830 ntBASIC17.98■□□□□ 0.47
LRFN1Q9P244 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.98■□□□□ 0.47
LRFN1Q9P244 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.98■□□□□ 0.47
LRFN1Q9P244 RBM17P1-201ENST00000453646 1190 ntBASIC17.98■□□□□ 0.47
LRFN1Q9P244 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRFN1Q9P244 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.98■□□□□ 0.47
LRFN1Q9P244 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.98■□□□□ 0.47
LRFN1Q9P244 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms