Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 AC006015.1-201ENST00000429970 570 ntBASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 BID-214ENST00000617586 542 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC52A3Q9NQ40 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 AC087623.3-201ENST00000607047 1098 ntBASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 AL589743.5-201ENST00000616611 1050 ntBASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 MIR6821-201ENST00000617625 74 ntBASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC52A3Q9NQ40 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC52A3Q9NQ40 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 AC026271.2-201ENST00000428091 497 ntBASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 KRT18P5-201ENST00000436075 1291 ntBASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 TFP1-202ENST00000475455 1573 ntBASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC52A3Q9NQ40 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC52A3Q9NQ40 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms